RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
NEK9-202ENST00000553823 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 PCDHA6Q9UN73 950 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 ADAMTS5Q9UNA0 930 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 AGTPBP1Q9UPW5 1226 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 PCDHA8Q9Y5H6 950 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 ZNF536O15090 1300 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 ABCB11O95342 1321 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 FIBPO43427 364 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 CETPP11597 493 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 YY1P25490 414 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
NEK9-202ENST00000553823 PABPC4Q13310 644 aaKnown RBP eCLIP13.46□□□□□ -0.25
NEK9-202ENST00000553823 RILPL1Q5EBL4 403 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 RASGRP4Q8TDF6 673 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
NEK9-202ENST00000553823 CCPG1Q9ULG6 757 aa13.46□□□□□ -0.25
NEK9-202ENST00000553823 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
NEK9-202ENST00000553823 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
NEK9-202ENST00000553823 MYH7BA7E2Y1 1941 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 SPDYE16A6NNV3 312 aaPredicted RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 OAZ1P54368 228 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 CEBPZQ03701 1054 aaKnown RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 EARS2Q5JPH6 523 aaKnown RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 GPAT2Q6NUI2 795 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 TMEM87AQ8NBN3 555 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 AGBL1Q96MI9 1066 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 ASCC2Q9H1I8 757 aaPredicted RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 GDPD2Q9HCC8 539 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
NEK9-202ENST00000553823 BIN2Q9UBW5 565 aaPredicted RBP13.45□□□□□ -0.26
NEK9-202ENST00000553823 CCL15-CCL14A0A0B4J2E2 113 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 PTMSP20962 102 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 OSBPP22059 807 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 CLK2P49760 499 aaKnown RBP13.44□□□□□ -0.26
NEK9-202ENST00000553823 ZNF157P51786 506 aaPredicted RBP13.44□□□□□ -0.26
NEK9-202ENST00000553823 FSTL1Q12841 308 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
NEK9-202ENST00000553823 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEK9-202ENST00000553823 CCL15Q16663 113 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 UBE2SQ16763 222 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 JAKMIP3Q5VZ66 844 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 MB21D1Q8N884 522 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 P2RX7Q99572 595 aaKnown RBP13.44□□□□□ -0.26
NEK9-202ENST00000553823 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEK9-202ENST00000553823 CLIC4Q9Y696 253 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
NEK9-202ENST00000553823 A0A0G2JMZ2 1700 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 MEIS2O14770 477 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 OPLAHO14841 1288 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 YEATS4O95619 227 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 ALAS1P13196 640 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 NASPP49321 788 aaPredicted RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 LEO1Q8WVC0 666 aaPredicted RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 RCOR1Q9UKL0 485 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 SLC45A1Q9Y2W3 748 aa13.43□□□□□ -0.26
NEK9-202ENST00000553823 RBBP6Q7Z6E9 1792 aaKnown RBP13.43□□□□□ -0.26
NEK9-202ENST00000553823 ELP1O95163 1332 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 GCOM1H8Y6P7 765 aaPredicted RBP13.42□□□□□ -0.26
NEK9-202ENST00000553823 FOSP01100 380 aaPredicted RBP13.42□□□□□ -0.26
NEK9-202ENST00000553823 POLR2MP0CAP2 368 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 HERVK_113P62684 666 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 AP3B2Q13367 1082 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 TMEM132BQ14DG7 1078 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 STK38Q15208 465 aa13.42□□□□□ -0.26
NEK9-202ENST00000553823 INF2Q27J81 1249 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms