RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	MANSC4	A6NHS7	340 aa	Predicted RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ALAS1	P13196	640 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PTMS	P20962	102 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MOGS	Q13724	837 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	NONO	Q15233	471 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TKFC	Q3LXA3	575 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RILPL1	Q5EBL4	403 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	GPAT2	Q6NUI2	795 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	FAM173B	Q6P4H8	233 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ANKRD23	Q86SG2	305 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MCF2L2	Q86YR7	1114 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RASAL3	Q86YV0	1011 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SAMD3	Q8N6K7	520 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	HHIPL1	Q96JK4	782 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MS4A4A	Q96JQ5	239 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	AGBL1	Q96MI9	1066 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	P2RX7	Q99572	595 aa	Known RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TFIP11	Q9UBB9	837 aa	Known RBP	11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PCDHA6	Q9UN73	950 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SLC45A1	Q9Y2W3	748 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PCDHA8	Q9Y5H6	950 aa		11.49	□□□□□ -0.57
NPIPA1-208	ENST00000545831	DDX11L8	A8MPP1	907 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831		M0R2N6	131 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ATP2A1	O14983	1001 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	FOS	P01100	380 aa	Predicted RBP	11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SLC10A3	P09131	477 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	HOXD11	P31277	338 aa	Predicted RBP	11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MCM4	P33991	863 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TRAPPC10	P48553	1259 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	INHBE	P58166	350 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PLS1	Q14651	629 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	JAKMIP3	Q5VZ66	844 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	LBX2	Q6XYB7	198 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PIK3AP1	Q6ZUJ8	805 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TNFRSF25	Q93038	417 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TEX13B	Q9BXU2	312 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	BIN2	Q9UBW5	565 aa	Predicted RBP	11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CNPY2	Q9Y2B0	182 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ZNF536	O15090	1300 aa		11.48	□□□□□ -0.57
NPIPA1-208	ENST00000545831	BTBD19	C9JJ37	291 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PDHX	O00330	501 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	FIBP	O43427	364 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CFB	P00751	764 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	POLR2M	P0CAP2	368 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	STAT3	P40763	770 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	HERVK_113	P62684	666 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	AP3B2	Q13367	1082 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TMEM132B	Q14DG7	1078 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ANO1	Q5XXA6	986 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SNRNP48	Q6IEG0	339 aa	Known RBP	11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	REPS2	Q8NFH8	660 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RASGRP4	Q8TDF6	673 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	BRI3BP	Q8WY22	251 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SPATA32	Q96LK8	384 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TRERF1	Q96PN7	1200 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	EHMT1	Q9H9B1	1298 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MAP3K20	Q9NYL2	800 aa	Known RBP	11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RTEL1	Q9NZ71	1219 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CEP131	Q9UPN4	1083 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PTPRF	P10586	1907 aa		11.47	□□□□□ -0.57
NPIPA1-208	ENST00000545831	LOC285556	D6RIA3	1793 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TESPA1	A2RU30	521 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SPDYE3	A6NKU9	549 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PIK3CD	O00329	1044 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MEIS2	O14770	477 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	YEATS4	O95619	227 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	BMP15	O95972	392 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ATP2B1	P20020	1258 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	COPB2	P35606	906 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CLK2	P49760	499 aa	Known RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CEBPZ	Q03701	1054 aa	Known RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	STK38	Q15208	465 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SF3A1	Q15459	793 aa	Known RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	NFKBIB	Q15653	356 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	UBE2S	Q16763	222 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TTC38	Q5R3I4	469 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	USP17L6P	Q6QN14	398 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	CHAMP1	Q96JM3	812 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	USP28	Q96RU2	1077 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	NAP1L4	Q99733	375 aa	Known RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	PAGR1	Q9BTK6	254 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	MAF1	Q9H063	256 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ZCCHC17	Q9NP64	241 aa	Known RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RNF146	Q9NTX7	359 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	POLR3E	Q9NVU0	708 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	TMEM260	Q9NX78	707 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	FBXO40	Q9UH90	709 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ZNF214	Q9UL59	606 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	RABGAP1	Q9Y3P9	1069 aa		11.46	□□□□□ -0.57
NPIPA1-208	ENST00000545831	ADAMTS3	O15072	1205 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PRPF40A	O75400	957 aa	Known RBP	11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SLC25A27	O95847	323 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GCLC	P48506	637 aa	Predicted RBP	11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms