RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CTAGE5O15320 804 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
SCG3-202ENST00000542355 ATP2C1P98194 919 aaPredicted RBP12.55□□□□□ -0.4
SCG3-202ENST00000542355 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 TBCKQ8TEA7 893 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 CUL5Q93034 780 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
SCG3-202ENST00000542355 WRNIP1Q96S55 665 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
SCG3-202ENST00000542355 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 UBE2SQ16763 222 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 USH1GQ495M9 461 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 SASS6Q6UVJ0 657 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 FBXO11Q86XK2 927 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
SCG3-202ENST00000542355 FERMT2Q96AC1 680 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
SCG3-202ENST00000542355 CCNT1O60563 726 aaKnown RBP12.54□□□□□ -0.4
SCG3-202ENST00000542355 TYRO3Q06418 890 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 PRKG1Q13976 671 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 C4orf32Q8N8J7 132 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 GINM1Q9NU53 330 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
SCG3-202ENST00000542355 SUPT20HL1Q3ZLR7 823 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 NEK8Q86SG6 692 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 SCYL3Q8IZE3 742 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 DCPSQ96C86 337 aaKnown RBP12.53□□□□□ -0.4
SCG3-202ENST00000542355 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 FBXO28Q9NVF7 368 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
SCG3-202ENST00000542355 TAL1P17542 331 aaPredicted RBP12.53□□□□□ -0.4
SCG3-202ENST00000542355 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 DGKZQ13574 1117 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 IL17AQ16552 155 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
SCG3-202ENST00000542355 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 SPP2Q13103 211 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 MTMR2Q13614 643 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 CCDC174Q6PII3 467 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 SULF1Q8IWU6 871 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 PDILTQ8N807 584 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 CNNM3Q8NE01 707 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 FEM1BQ9UK73 627 aa12.52□□□□□ -0.4
SCG3-202ENST00000542355 SBF1O95248 1867 aa12.52□□□□□ -0.41
SCG3-202ENST00000542355 PTPRAP18433 802 aa12.52□□□□□ -0.41
SCG3-202ENST00000542355 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.41
SCG3-202ENST00000542355 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
SCG3-202ENST00000542355 LPAR1Q92633 364 aa12.52□□□□□ -0.41
SCG3-202ENST00000542355 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
SCG3-202ENST00000542355 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.41
SCG3-202ENST00000542355 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
SCG3-202ENST00000542355 ADM5C9JUS6 153 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 PLA2G6O60733 806 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
SCG3-202ENST00000542355 A0A087WWV3 80 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 MEIS2O14770 477 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
SCG3-202ENST00000542355 EDIL3O43854 480 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 NEMFO60524 1076 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 EPHX2P34913 555 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 ANO6Q4KMQ2 910 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
SCG3-202ENST00000542355 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
SCG3-202ENST00000542355 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 SERTAD1Q9UHV2 236 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 LAD1O00515 517 aa12.5□□□□□ -0.41
SCG3-202ENST00000542355 USP2O75604 605 aaPredicted RBP12.5□□□□□ -0.41
SCG3-202ENST00000542355 CDC25AP30304 524 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms