RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 VTI1AQ96AJ9 217 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 DCTPP1Q9H773 170 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 EYSQ5T1H1 3165 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 TTC41PQ6P2S7 1318 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 ERC2O15083 957 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 PLA2G6O60733 806 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 MTIF3Q9H2K0 278 aaKnown RBP13.19□□□□□ -0.3
LMO3-214ENST00000536509 ZNF576Q9H609 170 aa13.19□□□□□ -0.3
LMO3-214ENST00000536509 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
LMO3-214ENST00000536509 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
LMO3-214ENST00000536509 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 ZEB2O60315 1214 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 FAM126BQ8IXS8 530 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 FGD4Q96M96 766 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
LMO3-214ENST00000536509 NAPBQ9H115 298 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
LMO3-214ENST00000536509 PRUNE2Q8WUY3 3088 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 PRDM1O75626 825 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 PRKCSHP14314 528 aaPredicted RBP13.17□□□□□ -0.3
LMO3-214ENST00000536509 SLC1A4P43007 532 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 TNFAIP2Q03169 654 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
LMO3-214ENST00000536509 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
LMO3-214ENST00000536509 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
LMO3-214ENST00000536509 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 Q9Y3F1 56 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
LMO3-214ENST00000536509 M0R2C6 588 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 ADCY6O43306 1168 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 CD4P01730 458 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 CSF2RAP15509 400 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 TFAP4Q01664 338 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 PPARAQ07869 468 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 RAB30Q15771 203 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
LMO3-214ENST00000536509 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 IL23AQ9NPF7 189 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
LMO3-214ENST00000536509 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
LMO3-214ENST00000536509 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
LMO3-214ENST00000536509 MYO9BQ13459 2157 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 CTAGE5O15320 804 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
LMO3-214ENST00000536509 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
LMO3-214ENST00000536509 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 PBX4Q9BYU1 374 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
LMO3-214ENST00000536509 GNEQ9Y223 722 aaKnown RBP13.15□□□□□ -0.3
LMO3-214ENST00000536509 ZNF536O15090 1300 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 ZMYM1Q5SVZ6 1142 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
LMO3-214ENST00000536509 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 PPP1R12CQ9BZL4 782 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 VTA1Q9NP79 307 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 GBF1Q92538 1859 aa13.14□□□□□ -0.31
LMO3-214ENST00000536509 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 FGBP02675 491 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 ALAS1P13196 640 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 MCCP23508 829 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 CLCN6P51797 869 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 TSHZ3Q63HK5 1081 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
LMO3-214ENST00000536509 RPUSD2Q8IZ73 545 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms