RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CHMP2AO43633 222 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 NCAPHQ15003 741 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 LRRC8AQ8IWT6 810 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 CUL5Q93034 780 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 ZBTB5O15062 677 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 DLK2Q6UY11 383 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 ANKS1AQ92625 1134 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 ZNRF3Q9ULT6 936 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 DOCK2Q92608 1830 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 SLX4Q8IY92 1834 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 USP27XA6NNY8 438 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
PTPRK-216ENST00000524481 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 MEIS1O00470 390 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 OFD1O75665 1012 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 KRT18P05783 430 aaKnown RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 UQCRHP07919 91 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 BMP3P12645 472 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 STAT3P40763 770 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 MDM2Q00987 491 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 RASA3Q14644 834 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 SLC39A2Q9NP94 309 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 DACH1Q9UI36 760 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 MLKLQ8NB16 471 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-216ENST00000524481 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
PTPRK-216ENST00000524481 N4BP3O15049 544 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 NRDCO43847 1150 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-216ENST00000524481 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TNNT1P13805 278 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 KCNA3P22001 575 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 PDE4DQ08499 809 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 MCM6Q14566 821 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 LRRC41Q15345 812 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 MTRQ99707 1265 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 RIOX1Q9H6W3 641 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 PCDHA12Q9UN75 941 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
PTPRK-216ENST00000524481 WNT10BO00744 389 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TEX33O43247 280 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TPM3P06753 285 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TMED8Q6PL24 325 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-216ENST00000524481 DISC1Q9NRI5 854 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 ZNF500O60304 480 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-216ENST00000524481 CYP2W1Q8TAV3 490 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
PTPRK-216ENST00000524481 LONP1P36776 959 aaKnown RBP13.23□□□□□ -0.29
PTPRK-216ENST00000524481 SIAH1Q8IUQ4 282 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 MRFAP1L1Q96HT8 127 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 FAM170AA1A519 330 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 SORBS3O60504 671 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 NOC3LQ8WTT2 800 aaKnown RBP13.23□□□□□ -0.29
PTPRK-216ENST00000524481 ZNF341Q9BYN7 854 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 ARHGEF10LQ9HCE6 1279 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 ZBTB21Q9ULJ3 1066 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 MYH6P13533 1939 aa13.23□□□□□ -0.29
PTPRK-216ENST00000524481 FCER1AP12319 257 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 PRCPP42785 496 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 MORC3Q14149 939 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.291e-8■■■□□ 16
PTPRK-216ENST00000524481 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-216ENST00000524481 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 DPYDQ12882 1025 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 AMNQ9BXJ7 453 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 IDI2Q9BXS1 227 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-216ENST00000524481 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 KMT5BQ4FZB7 885 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 SYDE2Q5VT97 1194 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 MAEAQ7L5Y9 396 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms