RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CCDC102AQ96A19 550 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 ASCC2Q9H1I8 757 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 RAVER2Q9HCJ3 691 aaKnown RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 RIC8AQ9NPQ8 531 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 SLC45A1Q9Y2W3 748 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 RLFQ13129 1914 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 PDHXO00330 501 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 ALAS1P13196 640 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 HERVK_113P62684 666 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 DNM1Q05193 864 aaKnown RBP10.25□□□□□ -0.77
CSMD1-208ENST00000520561 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 NPY5RQ15761 445 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 TKFCQ3LXA3 575 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 MCTP2Q6DN12 878 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 SNRNP48Q6IEG0 339 aaKnown RBP10.25□□□□□ -0.77
CSMD1-208ENST00000520561 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 LBX2Q6XYB7 198 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 PIK3AP1Q6ZUJ8 805 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 SMCR8Q8TEV9 937 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-208ENST00000520561 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 PARK7Q99497 189 aaKnown RBP10.25□□□□□ -0.77
CSMD1-208ENST00000520561 TEX13BQ9BXU2 312 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 CFAP45Q9UL16 551 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 ZNF536O15090 1300 aa10.25□□□□□ -0.77
CSMD1-208ENST00000520561 COL11A1P12107 1806 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-208ENST00000520561 BTBD19C9JJ37 291 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 GCOM1H8Y6P7 765 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-208ENST00000520561 ATP2A1O14983 1001 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 FIBPO43427 364 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 POLR2MP0CAP2 368 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 TAL1P17542 331 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-208ENST00000520561 COPB2P35606 906 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 PLS1Q14651 629 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 TMEM132BQ14DG7 1078 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 NONOQ15233 471 aaKnown RBP eCLIP10.24□□□□□ -0.77
CSMD1-208ENST00000520561 UBE2SQ16763 222 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 JAKMIP3Q5VZ66 844 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 CLEC17AQ6ZS10 378 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 REPS2Q8NFH8 660 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 RASGRP4Q8TDF6 673 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 PAGR1Q9BTK6 254 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 EHMT1Q9H9B1 1298 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 RNF146Q9NTX7 359 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 ZNF214Q9UL59 606 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-208ENST00000520561 PCDHA6Q9UN73 950 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 PCDHA8Q9Y5H6 950 aa10.24□□□□□ -0.77
CSMD1-208ENST00000520561 SPDYE3A6NKU9 549 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 M0R2N6 131 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 CFBP00751 764 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 FOSP01100 380 aaPredicted RBP10.23□□□□□ -0.77
CSMD1-208ENST00000520561 PTMSP20962 102 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 STAT3P40763 770 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 TRAPPC10P48553 1259 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 APLP1P51693 650 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 GRM1Q13255 1194 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 TRERF1Q96PN7 1200 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 P2RX7Q99572 595 aaKnown RBP10.23□□□□□ -0.77
CSMD1-208ENST00000520561 SCAND2PQ9GZW5 306 aaPredicted RBP10.23□□□□□ -0.77
CSMD1-208ENST00000520561 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 ZCCHC17Q9NP64 241 aaKnown RBP10.23□□□□□ -0.77
CSMD1-208ENST00000520561 HOMER2Q9NSB8 354 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
CSMD1-208ENST00000520561 CEP131Q9UPN4 1083 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 CNPY2Q9Y2B0 182 aa10.23□□□□□ -0.77
CSMD1-208ENST00000520561 TESPA1A2RU30 521 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-208ENST00000520561 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 OPLAHO14841 1288 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 YEATS4O95619 227 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 SLC25A27O95847 323 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 BMP15O95972 392 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 CYP2C8P10632 490 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 GCLCP48506 637 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-208ENST00000520561 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
CSMD1-208ENST00000520561 INHBEP58166 350 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 STK38Q15208 465 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 INF2Q27J81 1249 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
CSMD1-208ENST00000520561 TTC38Q5R3I4 469 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
CSMD1-208ENST00000520561 SPATA32Q96LK8 384 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms