RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 LAMA2P24043 3122 aaKnown RBP14.68□□□□□ -0.06
CSMD1-205ENST00000519623 ELP1O95163 1332 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.67□□□□□ -0.06
CSMD1-205ENST00000519623 ASB14A6NK59 587 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 ASGR1P07306 291 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 C6orf222P0C671 652 aaPredicted RBP14.67□□□□□ -0.06
CSMD1-205ENST00000519623 CCDC96Q2M329 555 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 MFSD6Q6ZSS7 791 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 TBC1D10CQ8IV04 446 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 PCSK9Q8NBP7 692 aaKnown RBP14.67□□□□□ -0.06
CSMD1-205ENST00000519623 TTC14Q96N46 770 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 CCPG1Q9ULG6 757 aa14.67□□□□□ -0.06
CSMD1-205ENST00000519623 DDX49Q9Y6V7 483 aaKnown RBP14.67□□□□□ -0.06
CSMD1-205ENST00000519623 PDHBP11177 359 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 PCP11498 1178 aaKnown RBP14.66□□□□□ -0.06
CSMD1-205ENST00000519623 EPHB4P54760 987 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 SYDE2Q5VT97 1194 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 PURBQ96QR8 312 aaKnown RBP14.66□□□□□ -0.06
CSMD1-205ENST00000519623 SPC25Q9HBM1 224 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 GPCPD1Q9NPB8 672 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 TMEM39AQ9NV64 488 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 GNEQ9Y223 722 aaKnown RBP14.66□□□□□ -0.06
CSMD1-205ENST00000519623 STXBP5LQ9Y2K9 1186 aa14.66□□□□□ -0.06
CSMD1-205ENST00000519623 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
CSMD1-205ENST00000519623 LCTP09848 1927 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 DCDC2CA8MYV0 355 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 SNHG28P0DPA3 235 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 RAG1P15918 1043 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 MFAP1P55081 439 aaKnown RBP14.65□□□□□ -0.06
CSMD1-205ENST00000519623 TAPT1Q6NXT6 567 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 CWC27Q6UX04 472 aaKnown RBP14.65□□□□□ -0.06
CSMD1-205ENST00000519623 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 SLC17A8Q8NDX2 589 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 MORC4Q8TE76 937 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 PDGFCQ9NRA1 345 aa14.65□□□□□ -0.06
CSMD1-205ENST00000519623 ARVCFO00192 962 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 SMPD1P17405 629 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 PTGS1P23219 599 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 BEX3Q00994 111 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
CSMD1-205ENST00000519623 TMEM63BQ5T3F8 832 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 VTI1AQ96AJ9 217 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 RNF41Q9H4P4 317 aaPredicted RBP14.64□□□□□ -0.07
CSMD1-205ENST00000519623 TBX21Q9UL17 535 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 NEDD4P46934 1319 aa14.64□□□□□ -0.07
CSMD1-205ENST00000519623 NFIBO00712 420 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 ZNF213O14771 459 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 TIMP1P01033 207 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 NOL8Q76FK4 1167 aaKnown RBP14.63□□□□□ -0.07
CSMD1-205ENST00000519623 EEPD1Q7L9B9 569 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 DGKHQ86XP1 1220 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 CLEC4DQ8WXI8 215 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 ESR2Q92731 530 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 GUCD1Q96NT3 240 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 ZKSCAN3Q9BRR0 538 aa14.63□□□□□ -0.07
CSMD1-205ENST00000519623 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-205ENST00000519623 DYNC1LI2O43237 492 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-205ENST00000519623 SMAD3P84022 425 aaKnown RBP14.62□□□□□ -0.07
CSMD1-205ENST00000519623 FPGSQ05932 587 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-205ENST00000519623 FAM126BQ8IXS8 530 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 SLC43A3Q8NBI5 491 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 SEMA6BQ9H3T3 888 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 VTA1Q9NP79 307 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 Q9Y3F1 56 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 MROH7Q68CQ1 1323 aa14.62□□□□□ -0.07
CSMD1-205ENST00000519623 HIP1O00291 1037 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 KDM4AO75164 1064 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 CD4P01730 458 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 NT5C2P49902 561 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 ALDH5A1P51649 535 aaPredicted RBP14.61□□□□□ -0.07
CSMD1-205ENST00000519623 FSCN1Q16658 493 aaKnown RBP14.61□□□□□ -0.07
CSMD1-205ENST00000519623 MFSD5Q6N075 450 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 CXCL17Q6UXB2 119 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 KIAA1211Q6ZU35 1233 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 C16orf59Q7L2K0 433 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 AP5M1Q9H0R1 490 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 ZSWIM5Q9P217 1185 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 ADD3Q9UEY8 706 aaKnown RBP14.61□□□□□ -0.07
CSMD1-205ENST00000519623 PNMA2Q9UL42 364 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
CSMD1-205ENST00000519623 A0A0C4DFX4 3053 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 GRIN2DO15399 1336 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 LRRC37A2A6NM11 1700 aa14.61□□□□□ -0.07
CSMD1-205ENST00000519623 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 RBM47A0AV96 593 aaKnown RBP14.6□□□□□ -0.07
CSMD1-205ENST00000519623 PTPDC1A2A3K4 754 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 CABYRO75952 493 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 GOLGA8HP0CJ92 632 aa14.6□□□□□ -0.07
CSMD1-205ENST00000519623 PDE4AP27815 886 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms