RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PCDHA11Q9Y5I1 949 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 BAZ1BQ9UIG0 1483 aaKnown RBP6.08□□□□□ -1.44
RTN4-215ENST00000491592 CEP164Q9UPV0 1460 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 VPS8Q8N3P4 1428 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 A0A087WZG4 1122 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 ESR1P03372 595 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 GSNP06396 782 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 CD8BP10966 210 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 JUNBP17275 347 aaPredicted RBP6.07□□□□□ -1.44
RTN4-215ENST00000491592 GRB10Q13322 594 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 OS9Q13438 667 aaPredicted RBP6.07□□□□□ -1.44
RTN4-215ENST00000491592 ZFYVE27Q5T4F4 411 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 BVESQ8NE79 360 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
RTN4-215ENST00000491592 MRFAP1L1Q96HT8 127 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 RCC1LQ96I51 464 aaKnown RBP6.07□□□□□ -1.44
RTN4-215ENST00000491592 LGR4Q9BXB1 951 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 CHPF2Q9P2E5 772 aa6.07□□□□□ -1.44
RTN4-215ENST00000491592 AGRPO00253 132 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 PPFIA4O75335 1185 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 BMP8BP34820 402 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
RTN4-215ENST00000491592 EGR3Q06889 387 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 CWF19L1Q69YN2 538 aaKnown RBP6.06□□□□□ -1.44
RTN4-215ENST00000491592 OGFOD2Q6N063 350 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 KRBA2Q6ZNG9 492 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 CBLL1Q75N03 491 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 SPRED2Q7Z698 418 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 FAM9BQ8IZU0 186 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 ARHGEF39Q8N4T4 335 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 AGBL5Q8NDL9 886 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 PMM1Q92871 262 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 FOXP3Q9BZS1 431 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 CARS2Q9HA77 564 aaKnown RBP6.06□□□□□ -1.44
RTN4-215ENST00000491592 PAK6Q9NQU5 681 aaPredicted RBP6.06□□□□□ -1.44
RTN4-215ENST00000491592 LRP2BPQ9P2M1 347 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 TCFL5Q9UL49 500 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 EMC9Q9Y3B6 208 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 SOGA1O94964 1423 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 ABCC8Q09428 1581 aa6.06□□□□□ -1.44
RTN4-215ENST00000491592 IQCA1LA6NCM1 817 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 NOP56O00567 594 aaKnown RBP6.05□□□□□ -1.44
RTN4-215ENST00000491592 TBX1O43435 398 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 ZNF205O95201 554 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 KCNH1O95259 989 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 ITGAVP06756 1048 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 CD3EP07766 207 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 SYPP08247 313 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 ZP2Q05996 745 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 SSRP1Q08945 709 aaKnown RBP6.05□□□□□ -1.44
RTN4-215ENST00000491592 RNF111Q6ZNA4 994 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 POU5F2Q8N7G0 328 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 LRRN4CLQ8ND94 238 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 PNISRQ8TF01 805 aaKnown RBP6.05□□□□□ -1.44
RTN4-215ENST00000491592 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
RTN4-215ENST00000491592 TBX22Q9Y458 520 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 CLIP1P30622 1438 aa6.05□□□□□ -1.44
RTN4-215ENST00000491592 DHX57Q6P158 1386 aaKnown RBP6.05□□□□□ -1.44
RTN4-215ENST00000491592 STXBP3O00186 592 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
RTN4-215ENST00000491592 FKTNO75072 461 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 JAG1P78504 1218 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 POU4F1Q01851 419 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 TEKQ02763 1124 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
RTN4-215ENST00000491592 USHBP1Q8N6Y0 703 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 BTN2A2Q8WVV5 523 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 MRGPRX3Q96LB0 322 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 MTA3Q9BTC8 594 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 MAF1Q9H063 256 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 JADE2Q9NQC1 790 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 GPR55Q9Y2T6 319 aaPredicted RBP6.04□□□□□ -1.44
RTN4-215ENST00000491592 SMARCA2P51531 1590 aa6.04□□□□□ -1.44
RTN4-215ENST00000491592 CUX2O14529 1486 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 A0A1W2PQU0 124 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 SSU72P8A0A1W2PR75 194 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 IFNGR1P15260 489 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 VAV1P15498 845 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 ITGB5P18084 799 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 FUT4P22083 530 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 PPP2R2AP63151 447 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 AMPD2Q01433 879 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 DPY19L1Q2PZI1 675 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 GTF2IRD2BQ6EKJ0 949 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 TSHZ1Q6ZSZ6 1077 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 GTF2IRD2Q86UP8 949 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 CCDC146Q8IYE0 955 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 DNAJC7Q99615 494 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 SLC12A9Q9BXP2 914 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 LMCD1Q9NZU5 365 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 COMMD10Q9Y6G5 202 aa6.03□□□□□ -1.44
RTN4-215ENST00000491592 KDM2BQ8NHM5 1336 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms