RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CCT2P78371 535 aaKnown RBP18.15■□□□□ 0.5
PCCB-218ENST00000490504 KCTD2Q14681 263 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
PCCB-218ENST00000490504 MCTP1Q6DN14 999 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 RASGRP2Q7LDG7 609 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 GMCL1Q96IK5 515 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 MAML3Q96JK9 1138 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
PCCB-218ENST00000490504 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
PCCB-218ENST00000490504 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 JAK2O60674 1132 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 COPB2P35606 906 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
PCCB-218ENST00000490504 PRAMEF19Q5SWL8 479 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 NSUN7Q8NE18 718 aaKnown RBP18.14■□□□□ 0.49
PCCB-218ENST00000490504 IGDCC4Q8TDY8 1250 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 ZSWIM5Q9P217 1185 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 DDX20Q9UHI6 824 aaKnown RBP18.14■□□□□ 0.49
PCCB-218ENST00000490504 MTMR6Q9Y217 621 aa18.14■□□□□ 0.49
PCCB-218ENST00000490504 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
PCCB-218ENST00000490504 TRAK2O60296 914 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 DTNBO60941 627 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 F13A1P00488 732 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 LIFRP42702 1097 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
PCCB-218ENST00000490504 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 KCTD1Q719H9 257 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 SGMS1Q86VZ5 419 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 LY9Q9HBG7 655 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 KIF3AQ9Y496 699 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 ATP6V1DQ9Y5K8 247 aa18.13■□□□□ 0.49
PCCB-218ENST00000490504 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 EVI5O60447 810 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 SKOR2Q2VWA4 1001 aaPredicted RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 RCSD1Q6JBY9 416 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 ESR2Q92731 530 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 TCP11L1Q9NUJ3 509 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 COLQQ9Y215 455 aaPredicted RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 NR2E3Q9Y5X4 410 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 PTPDC1A2A3K4 754 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 VPS37CA5D8V6 355 aaPredicted RBP18.12■□□□□ 0.49
PCCB-218ENST00000490504 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 STAT2P52630 851 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 FAM184AQ8NB25 1140 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
PCCB-218ENST00000490504 PFASO15067 1338 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 CEP290O15078 2479 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 COL6A1P12109 1028 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
PCCB-218ENST00000490504 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
PCCB-218ENST00000490504 ANO1Q5XXA6 986 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 TMEM47Q9BQJ4 181 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 DIS3Q9Y2L1 958 aaKnown RBP18.11■□□□□ 0.49
PCCB-218ENST00000490504 ZNF236Q9UL36 1845 aa18.11■□□□□ 0.49
PCCB-218ENST00000490504 ERICH2A1L162 156 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 MSCO60682 206 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 PLA2G6O60733 806 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 OAZ1P54368 228 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 SNAP25P60880 206 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
PCCB-218ENST00000490504 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 SEPT4O43236 478 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 FDX1P10109 184 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 TOP1P11387 765 aaKnown RBP18.09■□□□□ 0.49
PCCB-218ENST00000490504 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCCB-218ENST00000490504 WTAPQ15007 396 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 TMTC2Q8N394 836 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 AGBL1Q96MI9 1066 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 UBAC1Q9BSL1 405 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 LMBRD1Q9NUN5 540 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 ZNF536O15090 1300 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 NID2Q14112 1375 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 DNAJC25-GNG10A0A024R161 153 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 ZBTB43O43298 467 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 SLC34A2O95436 690 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 TAL1P17542 331 aaPredicted RBP18.09■□□□□ 0.49
PCCB-218ENST00000490504 NT5C2P49902 561 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 CCDC96Q2M329 555 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 CHST13Q8NET6 341 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 DCAF4Q8WV16 495 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 SENP2Q9HC62 589 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 HOMER2Q9NSB8 354 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
PCCB-218ENST00000490504 CPLX1O14810 134 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms