RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NOL9Q5SY16 702 aaKnown RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 SYCP2LQ5T4T6 812 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 ADAT2Q7Z6V5 191 aaKnown RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 PCGF5Q86SE9 256 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 CREBRFQ8IUR6 639 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 LRRC47Q8N1G4 583 aaKnown RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 CRACR2BQ8N4Y2 399 aaPredicted RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 ZNF513Q8N8E2 541 aaPredicted RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 SYTL5Q8TDW5 730 aaPredicted RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 BCL7CQ8WUZ0 217 aaPredicted RBP5.22□□□□□ -1.57
VPS41-212ENST00000482217 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 ARPC5LQ9BPX5 153 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 ADGRE2Q9UHX3 823 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 ZMYM5Q9UJ78 669 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 SNX11Q9Y5W9 270 aa5.22□□□□□ -1.57
VPS41-212ENST00000482217 PAX4O43316 350 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 POLD1P28340 1107 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 ZNF445P59923 1031 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 POMZP3Q6PJE2 187 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 NFXL1Q6ZNB6 911 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 THAP5Q7Z6K1 395 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 SPACA3Q8IXA5 215 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 ABI1Q8IZP0 508 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
VPS41-212ENST00000482217 JMYQ8N9B5 988 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 C1orf131Q8NDD1 294 aaKnown RBP5.21□□□□□ -1.58
VPS41-212ENST00000482217 BVESQ8NE79 360 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 HRASLS5Q96KN8 279 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 FGD4Q96M96 766 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 NEUROD6Q96NK8 337 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 PAGR1Q9BTK6 254 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 KANSL2Q9H9L4 492 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 PAK6Q9NQU5 681 aaPredicted RBP5.21□□□□□ -1.58
VPS41-212ENST00000482217 CHST7Q9NS84 486 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 GPATCH2Q9NW75 528 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 GFOD1Q9NXC2 390 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 DIS3Q9Y2L1 958 aaKnown RBP5.21□□□□□ -1.58
VPS41-212ENST00000482217 ST14Q9Y5Y6 855 aa5.21□□□□□ -1.58
VPS41-212ENST00000482217 NOP56O00567 594 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 ANP32CO43423 234 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 PRAMEF1O95521 474 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 FAM163BP0C2L3 166 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 ITIH2P19823 946 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 COPB2P35606 906 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 SSRP1Q08945 709 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 SNW1Q13573 536 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 LONRF2Q1L5Z9 754 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 CLEC16AQ2KHT3 1053 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 PLEKHG4Q58EX7 1191 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 ZC3H12BQ5HYM0 836 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 ICE2Q659A1 982 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 CBLL1Q75N03 491 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 SPATC1Q76KD6 591 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 TMC3Q7Z5M5 1100 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 ARHGEF39Q8N4T4 335 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 ZNF655Q8N720 491 aaPredicted RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 DAGLBQ8NCG7 672 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 THAP3Q8WTV1 239 aaPredicted RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 DSCC1Q9BVC3 393 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 SPATA9Q9BWV2 254 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 HDAC8Q9BY41 377 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 DUSP15Q9H1R2 295 aaPredicted RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 CHMP4BQ9H444 224 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 GEMIN8Q9NWZ8 242 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 LRP2BPQ9P2M1 347 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 APEX2Q9UBZ4 518 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 PLAGL2Q9UPG8 496 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 SF3B6Q9Y3B4 125 aaKnown RBP5.2□□□□□ -1.58
VPS41-212ENST00000482217 U3KQE9 123 aa5.2□□□□□ -1.58
VPS41-212ENST00000482217 GSNP06396 782 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 TAL1P17542 331 aaPredicted RBP5.19□□□□□ -1.58
VPS41-212ENST00000482217 GRB10Q13322 594 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 SAFB2Q14151 953 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS41-212ENST00000482217 C2orf27AQ580R0 203 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 TSPYL5Q86VY4 417 aaPredicted RBP5.19□□□□□ -1.58
VPS41-212ENST00000482217 LILRB2Q8N423 598 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 FIBCD1Q8N539 461 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 LRRN4CLQ8ND94 238 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 ASB11Q8WXH4 323 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 BRF1Q92994 677 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 CASS4Q9NQ75 786 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 CGGBP1Q9UFW8 167 aaPredicted RBP5.19□□□□□ -1.58
VPS41-212ENST00000482217 AKT3Q9Y243 479 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 EMC9Q9Y3B6 208 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
VPS41-212ENST00000482217 A0A1W2PQU0 124 aa5.18□□□□□ -1.58
VPS41-212ENST00000482217 SHISA3A0PJX4 238 aa5.18□□□□□ -1.58
VPS41-212ENST00000482217 IFRD1O00458 451 aaPredicted RBP5.18□□□□□ -1.58
VPS41-212ENST00000482217 DHX16O60231 1041 aaKnown RBP5.18□□□□□ -1.58
VPS41-212ENST00000482217 DIAPH1O60610 1272 aaKnown RBP5.18□□□□□ -1.58
VPS41-212ENST00000482217 ITGAVP06756 1048 aa5.18□□□□□ -1.58
VPS41-212ENST00000482217 DEKP35659 375 aaKnown RBP5.18□□□□□ -1.58
VPS41-212ENST00000482217 HSP90AA2PQ14568 343 aaPredicted RBP5.18□□□□□ -1.58
VPS41-212ENST00000482217 PLCL1Q15111 1095 aa5.18□□□□□ -1.58
VPS41-212ENST00000482217 LRRC41Q15345 812 aa5.18□□□□□ -1.58
VPS41-212ENST00000482217 EFCAB2Q5VUJ9 269 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms