RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ACTR10Q9NZ32 417 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 PRKAG3Q9UGI9 489 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 FHOD1Q9Y613 1164 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 RICTORQ6R327 1708 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 SCAPERQ9BY12 1400 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 H0Y8X5 98 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 ZNF205O95201 554 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 EPHX1P07099 455 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 VAV1P15498 845 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 CWF19L1Q69YN2 538 aaKnown RBP7.2□□□□□ -1.26
VPS50-214ENST00000477935 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 ANKS4BQ8N8V4 417 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 MYLIPQ8WY64 445 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
VPS50-214ENST00000477935 WHRNQ9P202 907 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 ZMYM5Q9UJ78 669 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 SRCAPQ6ZRS2 3230 aa7.2□□□□□ -1.26
VPS50-214ENST00000477935 CNTLNQ9NXG0 1405 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 FITM1A5D6W6 292 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 GLI1P08151 1106 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 EFCAB2Q5VUJ9 269 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 ADCY4Q8NFM4 1077 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 ABHD4Q8TB40 342 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 MAP6Q96JE9 813 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 FGD4Q96M96 766 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
VPS50-214ENST00000477935 NPATQ14207 1427 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 PLA2R1Q13018 1463 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 CFAP74Q9C0B2 1584 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 A0A087WZG4 1122 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 ZNF503-AS2A6NEH8 195 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
VPS50-214ENST00000477935 CHRNEQ04844 493 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 NR0B2Q15466 257 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 TIGD5Q53EQ6 642 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 TMEM67Q5HYA8 995 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 ADAT2Q7Z6V5 191 aaKnown RBP7.18□□□□□ -1.26
VPS50-214ENST00000477935 SPPL2CQ8IUH8 684 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 LILRA2Q8N149 483 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 FCRL2Q96LA5 508 aaPredicted RBP7.18□□□□□ -1.26
VPS50-214ENST00000477935 ZDHHC15Q96MV8 337 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 CDADC1Q9BWV3 514 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 SLC12A9Q9BXP2 914 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 GBP3Q9H0R5 595 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 C19orf44Q9H6X5 657 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 SF3B6Q9Y3B4 125 aaKnown RBP7.18□□□□□ -1.26
VPS50-214ENST00000477935 CAMSAP1Q5T5Y3 1602 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 HECW1Q76N89 1606 aa7.18□□□□□ -1.26
VPS50-214ENST00000477935 CPS1P31327 1500 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 USP2O75604 605 aaPredicted RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 PPM1BO75688 479 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 ENDOUP21128 410 aaKnown RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 PPP2R5DQ14738 602 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 NCAPHQ15003 741 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 RTP2Q5QGT7 225 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 LARP1BQ659C4 914 aaKnown RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 C6orf15Q6UXA7 325 aaPredicted RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 HHIPL1Q96JK4 782 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 ERVK13-1Q9NX77 482 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
VPS50-214ENST00000477935 DIS3Q9Y2L1 958 aaKnown RBP7.17□□□□□ -1.26
VPS50-214ENST00000477935 SIGLEC1Q9BZZ2 1709 aa7.16□□□□□ -1.26
VPS50-214ENST00000477935 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
VPS50-214ENST00000477935 KIR2DL1P43626 348 aaPredicted RBP7.16□□□□□ -1.26
VPS50-214ENST00000477935 KIR2DL2P43627 348 aaPredicted RBP7.16□□□□□ -1.26
VPS50-214ENST00000477935 LIN37Q96GY3 246 aaPredicted RBP7.16□□□□□ -1.26
VPS50-214ENST00000477935 C8orf37Q96NL8 207 aa7.16□□□□□ -1.26
VPS50-214ENST00000477935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS50-214ENST00000477935 SUGT1Q9Y2Z0 365 aa7.16□□□□□ -1.26
VPS50-214ENST00000477935 NOTOA8MTQ0 251 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 B2RBV5 119 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 PSPNO60542 156 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 GSTM1P09488 218 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 NOP2P46087 812 aaKnown RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 ZNF143P52747 638 aaPredicted RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 POU4F1Q01851 419 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 MPZL3Q6UWV2 235 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 FAM178BQ8IXR5 827 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 ZNF513Q8N8E2 541 aaPredicted RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 MICAL1Q8TDZ2 1067 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 HNRNPLLQ8WVV9 542 aaKnown RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 RCC1LQ96I51 464 aaKnown RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 FCRL3Q96P31 734 aaPredicted RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 RNF32Q9H0A6 362 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 APEX2Q9UBZ4 518 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
VPS50-214ENST00000477935 ZMYM3Q14202 1370 aa7.15□□□□□ -1.26
VPS50-214ENST00000477935 PLCH2O75038 1416 aa7.15□□□□□ -1.27
VPS50-214ENST00000477935 TCOF1Q13428 1488 aaKnown RBP7.15□□□□□ -1.27
VPS50-214ENST00000477935 AGLP35573 1532 aa7.15□□□□□ -1.27
VPS50-214ENST00000477935 FADS2P1A8MWK0 482 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 DDAH1O94760 285 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 EFEMP2O95967 443 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 CD3EP07766 207 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 FXNQ16595 210 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 OGFOD2Q6N063 350 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms