RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZSCAN26Q16670 478 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 POTEBQ6S5H4 581 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 NME9Q86XW9 330 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 BBOF1Q8ND07 529 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 SMCR8Q8TEV9 937 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CACTINQ8WUQ7 758 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PHACTR3Q96KR7 559 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 EPAS1Q99814 870 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 HINFPQ9BQA5 517 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CCDC90BQ9GZT6 254 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 MLXIPQ9HAP2 919 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 DBNLQ9UJU6 430 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 HYOU1Q9Y4L1 999 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PCDHB13Q9Y5F0 798 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 MYOM3Q5VTT5 1437 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TTI1O43156 1089 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CFBP00751 764 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 IGBP1P78318 339 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ZKSCAN8Q15776 578 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CYTH2Q99418 400 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 OSBPL10Q9BXB5 764 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 LRWD1Q9UFC0 647 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 SATB2Q9UPW6 733 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ANP32DO95626 131 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 AK2P54819 239 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 C2CD5Q86YS7 1000 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CENPKQ9BS16 269 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ABCA8O94911 1581 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 KRT7P08729 469 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 VCAM1P19320 739 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 PIK3CAP42336 1068 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 VCPP55072 806 aaKnown RBP7.5□□□□□ -1.21
BRCA1-210ENST00000471181 IQGAP2Q13576 1575 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 SLMAPQ14BN4 828 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CCNYQ8ND76 341 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 DISC1Q9NRI5 854 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CHPF2Q9P2E5 772 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 KCNH3Q9ULD8 1083 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ARHGEF11O15085 1522 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 hCG_2014768A0A024R1R8 64 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 DIAPH2O60879 1101 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 DNAJC6O75061 913 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 MBD4O95243 580 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 EPHB1P54762 984 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 TSC22D1Q15714 1073 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 LMBR1LQ6UX01 489 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 OTUD6AQ7L8S5 288 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CATSPER3Q86XQ3 398 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 TMTC1Q8IUR5 882 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 XAGE3Q8WTP9 111 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CAMSAP2Q08AD1 1489 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 OCRLQ01968 901 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 NBPF14Q5TI25 921 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 PATL1Q86TB9 770 aaKnown RBP7.5□□□□□ -1.21
BRCA1-210ENST00000471181 CABP7Q86V35 215 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ZBTB8OSQ8IWT0 167 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 SMC5Q8IY18 1101 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 DNAAF3Q8N9W5 541 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 HIPK4Q8NE63 616 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 ANGPTL2Q9UKU9 493 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 LRFN2Q9ULH4 789 aa7.5□□□□□ -1.21
BRCA1-210ENST00000471181 EIF3CLB5ME19 914 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 SUN1O94901 812 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 MRPS15P82914 257 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 BMP2KLQ5H9B9 411 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TTC38Q5R3I4 469 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 NAA35Q5VZE5 725 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 RSRC2Q7L4I2 434 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 STX19Q8N4C7 294 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 KLHL29Q96CT2 875 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CPSF3Q9UKF6 684 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TLK1Q9UKI8 766 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 EMILIN1Q9Y6C2 1016 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.214e-10■■■■■ 36.9
BRCA1-210ENST00000471181 EFCAB5A4FU69 1503 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM27P14373 513 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 PTPREP23469 700 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 GRAMD1BQ3KR37 738 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ARHGEF16Q5VV41 709 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CREB3L3Q68CJ9 461 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ST13P4Q8IZP2 240 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 DEPDC1BQ8WUY9 529 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 DYDC2Q96IM9 177 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 NUDCD1Q96RS6 583 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ZBTB18Q99592 522 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TESPA1A2RU30 521 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TLR3O15455 904 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CHEK2O96017 543 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 DLATP10515 647 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ANO4Q32M45 955 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 FRA10AC1Q70Z53 315 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ASZ1Q8WWH4 475 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TCP11Q8WWU5 503 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ANKRD2Q9GZV1 360 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TRPV6Q9H1D0 765 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms