RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 NAT16Q8N8M0 369 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 BVESQ8NE79 360 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 DIRC2Q96SL1 478 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 SLC6A17Q9H1V8 727 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 CGGBP1Q9UFW8 167 aaPredicted RBP6.43□□□□□ -1.38
COL9A1-206ENST00000470652 AKT3Q9Y243 479 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 YBX2Q9Y2T7 364 aaKnown RBP6.43□□□□□ -1.38
COL9A1-206ENST00000470652 NCANO14594 1321 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 PEG3Q9GZU2 1588 aa6.43□□□□□ -1.38
COL9A1-206ENST00000470652 NOP56O00567 594 aaKnown RBP6.42□□□□□ -1.38
COL9A1-206ENST00000470652 FGF10O15520 208 aaPredicted RBP6.42□□□□□ -1.38
COL9A1-206ENST00000470652 TBC1D8O95759 1140 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 KRT1P04264 644 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 AMPD2Q01433 879 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 HLA-DQA1Q5Y7H0 255 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 NLRX1Q86UT6 975 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 ZNF513Q8N8E2 541 aaPredicted RBP6.42□□□□□ -1.38
COL9A1-206ENST00000470652 FBXO15Q8NCQ5 510 aaPredicted RBP6.42□□□□□ -1.38
COL9A1-206ENST00000470652 NSUN3Q9H649 340 aaKnown RBP6.42□□□□□ -1.38
COL9A1-206ENST00000470652 CRTAC1Q9NQ79 661 aa6.42□□□□□ -1.38
COL9A1-206ENST00000470652 BAZ1BQ9UIG0 1483 aaKnown RBP6.41□□□□□ -1.38
COL9A1-206ENST00000470652 SMARCA2P51531 1590 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 NPIPB6E9PJ23 425 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 VAMP4O75379 141 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 TMEM253P0C7T8 217 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 IFNGR1P15260 489 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 EEF1DP3Q658K8 133 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 RCSD1Q6JBY9 416 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 TTLL10Q6ZVT0 673 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 SLCO6A1Q86UG4 719 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 IRF2BP1Q8IU81 584 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 TMEM52Q8NDY8 209 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 SHISA4Q96DD7 197 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 KCNK12Q9HB15 430 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 APEX2Q9UBZ4 518 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 GPR55Q9Y2T6 319 aaPredicted RBP6.41□□□□□ -1.38
COL9A1-206ENST00000470652 EMC9Q9Y3B6 208 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 TAF6LQ9Y6J9 622 aa6.41□□□□□ -1.38
COL9A1-206ENST00000470652 AURKAO14965 403 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 KLF4O43474 513 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 DPY19L1Q2PZI1 675 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 HSF5Q4G112 596 aaPredicted RBP6.4□□□□□ -1.38
COL9A1-206ENST00000470652 EEPD1Q7L9B9 569 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 MICAL1Q8TDZ2 1067 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 HNRNPLLQ8WVV9 542 aaKnown RBP6.4□□□□□ -1.38
COL9A1-206ENST00000470652 INTS4Q96HW7 963 aaKnown RBP6.4□□□□□ -1.38
COL9A1-206ENST00000470652 PTCHD1Q96NR3 888 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
COL9A1-206ENST00000470652 TOP2AP11388 1531 aaKnown RBP6.4□□□□□ -1.39
COL9A1-206ENST00000470652 C2orf71A6NGG8 1288 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 B2RBV5 119 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
COL9A1-206ENST00000470652 KCNH1O95259 989 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 PNLIPP16233 465 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 ARL4AP40617 200 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
COL9A1-206ENST00000470652 CEBPAP49715 358 aaPredicted RBP6.39□□□□□ -1.39
COL9A1-206ENST00000470652 SEPHS1P49903 392 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 JAMLQ86YT9 394 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 SIRT2Q8IXJ6 389 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 PLCD4Q9BRC7 762 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 MCMBPQ9BTE3 642 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 EPN3Q9H201 632 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 DCP1AQ9NPI6 582 aaPredicted RBP6.39□□□□□ -1.39
COL9A1-206ENST00000470652 BACE2Q9Y5Z0 518 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 NCAPD3P42695 1498 aa6.39□□□□□ -1.39
COL9A1-206ENST00000470652 A0A1W2PQ27 194 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 A0A1W2PQ64 194 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 A0A1W2PQC6 194 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 STXBP3O00186 592 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 SUSD5O60279 629 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 GJB6O95452 261 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 EFEMP2O95967 443 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 PRKCAP17252 672 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 PDE6BP35913 854 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 LAPTM5Q13571 262 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 RAB33AQ14088 237 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 DDR2Q16832 855 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 SV2CQ496J9 727 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 TRIM59Q8IWR1 403 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 CKAP2LQ8IYA6 745 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 JMJD8Q96S16 334 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 ST7Q9NRC1 585 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
COL9A1-206ENST00000470652 ACSL6Q9UKU0 697 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 HMGXB3Q12766 1538 aa6.38□□□□□ -1.39
COL9A1-206ENST00000470652 TRBV23OR9-2A0A075B6M9 112 aa6.37□□□□□ -1.39
COL9A1-206ENST00000470652 OR14I1A6ND48 311 aa6.37□□□□□ -1.39
COL9A1-206ENST00000470652 GALK1P51570 392 aa6.37□□□□□ -1.39
COL9A1-206ENST00000470652 CYP4F8P98187 520 aa6.37□□□□□ -1.39
COL9A1-206ENST00000470652 KCNA10Q16322 511 aa6.37□□□□□ -1.39
COL9A1-206ENST00000470652 MRM1Q6IN84 353 aaKnown RBP6.37□□□□□ -1.39
COL9A1-206ENST00000470652 ATG14Q6ZNE5 492 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms