RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 TOB1P50616 345 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 FSTL1Q12841 308 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 NOM1Q5C9Z4 860 aaKnown RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RASGRP4Q8TDF6 673 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 USP28Q96RU2 1077 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 ASCC2Q9H1I8 757 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 BIN2Q9UBW5 565 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-202ENST00000460790 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 CCDC194A0A1B0GVG4 234 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 TMEM88BA6NKF7 163 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 MEIS2O14770 477 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 OPLAHO14841 1288 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 TAL1P17542 331 aaPredicted RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 OSBPP22059 807 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 TRAPPC10P48553 1259 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 NASPP49321 788 aaPredicted RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 IRX3P78415 501 aaPredicted RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 JAKMIP3Q5VZ66 844 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 RASAL3Q86YV0 1011 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
CSDC2-202ENST00000460790 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
CSDC2-202ENST00000460790 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 TESPA1A2RU30 521 aaPredicted RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 CEBPZQ03701 1054 aaKnown RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 CCL15Q16663 113 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 ANKRD23Q86SG2 305 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 SAMD3Q8N6K7 520 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 LEO1Q8WVC0 666 aaPredicted RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 HHIPL1Q96JK4 782 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 SPATA32Q96LK8 384 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 LMBRD1Q9NUN5 540 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
CSDC2-202ENST00000460790 CLIC4Q9Y696 253 aa12.46□□□□□ -0.41
CSDC2-202ENST00000460790 ELP1O95163 1332 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 BTBD19C9JJ37 291 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 FIBPO43427 364 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 YEATS4O95619 227 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
CSDC2-202ENST00000460790 ALAS1P13196 640 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 PTMSP20962 102 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 STAT3P40763 770 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 HERVK_113P62684 666 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 GHRHRQ02643 423 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 SLC39A14Q15043 492 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 NONOQ15233 471 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSDC2-202ENST00000460790 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
CSDC2-202ENST00000460790 UBE2SQ16763 222 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 TKFCQ3LXA3 575 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 MCF2L2Q86YR7 1114 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 LINC00301Q8NCQ3 95 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 TBC1D5Q92609 795 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 TEX13BQ9BXU2 312 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
CSDC2-202ENST00000460790 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
CSDC2-202ENST00000460790 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
CSDC2-202ENST00000460790 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
CSDC2-202ENST00000460790 GCOM1H8Y6P7 765 aaPredicted RBP12.44□□□□□ -0.42
CSDC2-202ENST00000460790 CFBP00751 764 aa12.44□□□□□ -0.42
CSDC2-202ENST00000460790 SLC10A3P09131 477 aa12.44□□□□□ -0.42
CSDC2-202ENST00000460790 POLR2MP0CAP2 368 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms