RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 MOGSQ13724 837 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MYSM1Q5VVJ2 828 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 FAM173BQ6P4H8 233 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 KRT25Q7Z3Z0 450 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CPXCR1Q8N123 301 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 REXO1Q8N1G1 1221 aaKnown RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ZNF784Q8NCA9 323 aaPredicted RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TNFRSF25Q93038 417 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SCAND2PQ9GZW5 306 aaPredicted RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ASCC2Q9H1I8 757 aaPredicted RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PNMA3Q9UL41 463 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCPG1Q9ULG6 757 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PCDHA6Q9UN73 950 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PCDHA8Q9Y5H6 950 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCL15-CCL14A0A0B4J2E2 113 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TRAPPC10P48553 1259 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 INHBEP58166 350 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCL15Q16663 113 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TKFCQ3LXA3 575 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 GTF3C2Q8WUA4 911 aaPredicted RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 P2RX7Q99572 595 aaKnown RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MAF1Q9H063 256 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 RAVER2Q9HCJ3 691 aaKnown RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MAP3K20Q9NYL2 800 aaKnown RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ZNF536O15090 1300 aa14.34□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MANSC4A6NHS7 340 aaPredicted RBP14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SPDYE16A6NNV3 312 aaPredicted RBP14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 DDX11L8A8MPP1 907 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ALAS1P13196 640 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NONOQ15233 471 aaKnown RBP eCLIP14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RASAL3Q86YV0 1011 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RTEL1Q9NZ71 1219 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RCOR1Q9UKL0 485 aa14.33□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 STAT3P40763 770 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 HERVK_113P62684 666 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 MKRN3Q13064 507 aaKnown RBP14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TMEM132BQ14DG7 1078 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TEX13BQ9BXU2 312 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CNPY2Q9Y2B0 182 aa14.32□□□□□ -0.12
HLA-DPA1-244ENST00000453337 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PDHXO00330 501 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 MEIS2O14770 477 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 YEATS4O95619 227 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 BMP15O95972 392 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CFBP00751 764 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SLC10A3P09131 477 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PLS1Q14651 629 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 FIBPO43427 364 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PRPF40AO75400 957 aaKnown RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ATP2B1P20020 1258 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 COPB2P35606 906 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 GCLCP48506 637 aaPredicted RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 STK38Q15208 465 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 UBE2SQ16763 222 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TMEM87AQ8NBN3 555 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 LEO1Q8WVC0 666 aaPredicted RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms