RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 H7C1D1 291 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 GNAQP50148 359 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 WDR59Q6PJI9 974 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 FAM196AQ6ZSG2 479 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 GIMAP8Q8ND71 665 aaPredicted RBP11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 CD209Q9NNX6 404 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
CLSTN1-203ENST00000435891 SMCO2A6NFE2 343 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 MYO1CO00159 1063 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 RHOBTB3O94955 611 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 CYP2C19P33261 490 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TECP42680 631 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 VPS72Q15906 364 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 PIGSQ96S52 555 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 PNKPQ96T60 521 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 RASSF10A6NK89 507 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 B4DLN1 442 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 UFL1O94874 794 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TPM1P09493 284 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 LMAN1P49257 510 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 CABP7Q86V35 215 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TEX11Q8IYF3 940 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 MMTAG2Q9BU76 263 aaKnown RBP11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 RHBDL3P58872 404 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 KCNB1Q14721 858 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 JAKMIP3Q5VZ66 844 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 ICE2Q659A1 982 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TXLNBQ8N3L3 684 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 FUT8Q9BYC5 575 aa11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
CLSTN1-203ENST00000435891 USP17L5A8MUK1 530 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 FAM193AP78312 1265 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 ZSCAN26Q16670 478 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 CCDC178Q5BJE1 867 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 C16orf86Q6ZW13 317 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 ANKRD20A12PQ8NF67 263 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 CTAGE9A4FU28 777 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 NDUFA10O95299 355 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 OR52Z1P0C646 297 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 GSTO1P78417 241 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 TBCKQ8TEA7 893 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 LTBP4Q8N2S1 1624 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 ENC1O14682 589 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 EDIL3O43854 480 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 NCAPH2Q6IBW4 605 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 UBXN6Q9BZV1 441 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
CLSTN1-203ENST00000435891 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 SLURP2P0DP57 97 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 PDE4DQ08499 809 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 CSGALNACT2Q8N6G5 542 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 GEMIN8Q9NWZ8 242 aaKnown RBP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 HDAC6Q9UBN7 1215 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 PSMA7O14818 248 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 RHOXF2BP0C7M4 288 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 HERVK_113P62684 666 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 NONOQ15233 471 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 LONRF2Q1L5Z9 754 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 OR8K1Q8NGG5 319 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 RHOXF2Q9BQY4 288 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 RCCD1A6NED2 376 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 PRPHP41219 470 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 ASIC1P78348 528 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 GALNT17Q6IS24 598 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 KIAA0895Q8NCT3 520 aa11.65□□□□□ -0.54
CLSTN1-203ENST00000435891 COA7Q96BR5 231 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms