RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 NLRC4Q9NPP4 1024 aa9.01□□□□□ -0.97
HPS4-205ENST00000429411 FRMPD2Q68DX3 1309 aaPredicted RBP9.01□□□□□ -0.97
HPS4-205ENST00000429411 A0A1B0GTH6 734 aa9□□□□□ -0.97
HPS4-205ENST00000429411 KRT86O43790 486 aa9□□□□□ -0.97
HPS4-205ENST00000429411 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 N4BP1O75113 896 aaKnown RBP9□□□□□ -0.97
HPS4-205ENST00000429411 CYLC1P35663 651 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 DPYDQ12882 1025 aa9□□□□□ -0.97
HPS4-205ENST00000429411 USP17L2Q6R6M4 530 aa9□□□□□ -0.97
HPS4-205ENST00000429411 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
HPS4-205ENST00000429411 PIK3R5Q8WYR1 880 aa9□□□□□ -0.97
HPS4-205ENST00000429411 GBP3Q9H0R5 595 aa9□□□□□ -0.97
HPS4-205ENST00000429411 ABHD10Q9NUJ1 306 aa9□□□□□ -0.97
HPS4-205ENST00000429411 ADD3Q9UEY8 706 aaKnown RBP9□□□□□ -0.97
HPS4-205ENST00000429411 MINPP1Q9UNW1 487 aa9□□□□□ -0.97
HPS4-205ENST00000429411 TTC26A0AVF1 554 aa9□□□□□ -0.97
HPS4-205ENST00000429411 ERVV-1B6SEH8 477 aa9□□□□□ -0.97
HPS4-205ENST00000429411 FANCGO15287 622 aa9□□□□□ -0.97
HPS4-205ENST00000429411 FGFR2P21802 821 aa9□□□□□ -0.97
HPS4-205ENST00000429411 LRRC41Q15345 812 aa9□□□□□ -0.97
HPS4-205ENST00000429411 CCDC40Q4G0X9 1142 aa9□□□□□ -0.97
HPS4-205ENST00000429411 CABP7Q86V35 215 aa9□□□□□ -0.97
HPS4-205ENST00000429411 FBXL16Q8N461 479 aa9□□□□□ -0.97
HPS4-205ENST00000429411 FAM84BQ96KN1 310 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 C5P01031 1676 aa9□□□□□ -0.97
HPS4-205ENST00000429411 RIMBP2O15034 1052 aa9□□□□□ -0.97
HPS4-205ENST00000429411 C21orf2O43822 256 aa9□□□□□ -0.97
HPS4-205ENST00000429411 TBC1D8O95759 1140 aa9□□□□□ -0.97
HPS4-205ENST00000429411 BAG3O95817 575 aa9□□□□□ -0.97
HPS4-205ENST00000429411 DPEP1P16444 411 aa9□□□□□ -0.97
HPS4-205ENST00000429411 KLK7P49862 253 aa9□□□□□ -0.97
HPS4-205ENST00000429411 VSNL1P62760 191 aa9□□□□□ -0.97
HPS4-205ENST00000429411 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 SLC20A2Q08357 652 aa9□□□□□ -0.97
HPS4-205ENST00000429411 PKN1Q16512 942 aa9□□□□□ -0.97
HPS4-205ENST00000429411 CCDC93Q567U6 631 aa9□□□□□ -0.97
HPS4-205ENST00000429411 TCP11X2Q5H9J9 407 aa9□□□□□ -0.97
HPS4-205ENST00000429411 TTC19Q6DKK2 380 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 C2CD5Q86YS7 1000 aa9□□□□□ -0.97
HPS4-205ENST00000429411 NOA1Q8NC60 698 aaKnown RBP9□□□□□ -0.97
HPS4-205ENST00000429411 AKT1S1Q96B36 256 aa9□□□□□ -0.97
HPS4-205ENST00000429411 PHF20Q9BVI0 1012 aa9□□□□□ -0.97
HPS4-205ENST00000429411 DCP1AQ9NPI6 582 aaPredicted RBP9□□□□□ -0.97
HPS4-205ENST00000429411 KLRF2D3W0D1 207 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 YY1P25490 414 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 ZSCAN29Q8IWY8 852 aaPredicted RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 SMCR8Q8TEV9 937 aaPredicted RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 PANX2Q96RD6 677 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 MED15Q96RN5 788 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 TUBGCP2Q9BSJ2 902 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 FAM107BQ9H098 131 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 ADAM21Q9UKJ8 722 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 PPP1R3GB7ZBB8 358 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 NDUFA10O95299 355 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 ZNF18P17022 549 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 CACNB1Q02641 598 aaPredicted RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 TROAPQ12815 778 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 KRT26Q7Z3Y9 468 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 NELFCDQ8IXH7 590 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 RPGRQ92834 1020 aaKnown RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 PNKPQ96T60 521 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 NAA15Q9BXJ9 866 aaKnown RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 TMEM60Q9H2L4 133 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 KANSL2Q9H9L4 492 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 POLD4Q9HCU8 107 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 SAR1BQ9Y6B6 198 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 XDHP47989 1333 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 H0YIN7 160 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 BUB1O43683 1085 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 USO1O60763 962 aaKnown RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 ERVK-24P63145 666 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 TCERG1LQ5VWI1 586 aa8.99□□□□□ -0.97
HPS4-205ENST00000429411 LRRC47Q8N1G4 583 aaKnown RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 RIN2Q8WYP3 895 aaPredicted RBP8.99□□□□□ -0.97
HPS4-205ENST00000429411 POTEB2H3BUK9 544 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 RNF225M0QZC1 329 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 ADAMTS3O15072 1205 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 ZNF185O15231 689 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 PLCG1P19174 1290 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 IBSPP21815 317 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 RBM5P52756 815 aaKnown RBP eCLIP8.98□□□□□ -0.97
HPS4-205ENST00000429411 GRM1Q13255 1194 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 UBE4AQ14139 1066 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 ZNF658Q5TYW1 1059 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 RRAGAQ7L523 313 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 TXNRD3Q86VQ6 643 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 TMEM139Q8IV31 216 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 TEX11Q8IYF3 940 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 AGPAT5Q9NUQ2 364 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 CCDC151A5D8V7 595 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 FCER1AP12319 257 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 KRT83P78385 493 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 DDR1Q08345 913 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 C2orf54Q08AI8 447 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms