RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 MYH10P35580 1976 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 PLEKHA8P1O95397 391 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 FAM107AO95990 144 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 SATB1Q01826 763 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 SPA17Q15506 151 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 QPCTQ16769 361 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 C6orf89Q6UWU4 347 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 PARP9Q8IXQ6 854 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 EXOC1Q9NV70 894 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 TPX2Q9ULW0 747 aaKnown RBP18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 HYOU1Q9Y4L1 999 aa18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 V9GY48 417 aaPredicted RBP18.24■□□□□ 0.51
RHBDF1-204ENST00000428730 HEXIM1O94992 359 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 ZBED6P86452 979 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 SNCBQ16143 134 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 PCDHA13Q9Y5I0 950 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 TJP1Q07157 1748 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 ADAMTS7Q9UKP4 1686 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 A6NNZ2 444 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 EPHB6O15197 1021 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 DNM2P50570 870 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 TUBB8Q3ZCM7 444 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 CCDC121Q6ZUS5 278 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 MAATS1Q7Z4T9 603 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 DHX37Q8IY37 1157 aaKnown RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 FUKQ8N0W3 1084 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 MAGEC2Q9UBF1 373 aaPredicted RBP18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 MYH7P12883 1935 aa18.23■□□□□ 0.51
RHBDF1-204ENST00000428730 ATRNO75882 1429 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 CYP27B1O15528 508 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 BUB1O43683 1085 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ITGB3BPQ13352 177 aaPredicted RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 OR2W6PQ8NHA6 318 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ATP6V1G3Q96LB4 118 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ARHGAP20Q9P2F6 1191 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 NID2Q14112 1375 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 LRP6O75581 1613 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ERICH2A1L162 156 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 PPP1R12BO60237 982 aaPredicted RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 SKAP2O75563 359 aaPredicted RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 RPSAP08865 295 aaKnown RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 EEF1GP26641 437 aaKnown RBP18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 ITIH3Q06033 890 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 NPY5RQ15761 445 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 C2CD5Q86YS7 1000 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 TLR10Q9BXR5 811 aa18.22■□□□□ 0.51
RHBDF1-204ENST00000428730 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 PIK3AP1Q6ZUJ8 805 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 TACO1Q9BSH4 297 aaKnown RBP18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 KRT23Q9C075 422 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 TCP1P17987 556 aaKnown RBP18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 TMOD1P28289 359 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 CLNS1AP54105 237 aaKnown RBP18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 CASKIN2Q8WXE0 1202 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 TSGA10Q9BZW7 698 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 RMND1Q9NWS8 449 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 PLAAQ9Y263 795 aa18.21■□□□□ 0.51
RHBDF1-204ENST00000428730 GOLGA6L7A0A1B0GV03 622 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 USO1O60763 962 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 STAT6P42226 847 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 CABP4P57796 275 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 PLCB4Q15147 1175 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 LRCH2Q5VUJ6 765 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 TTI2Q6NXR4 508 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 CSGALNACT2Q8N6G5 542 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 RUBCNQ92622 972 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 TNFRSF25Q93038 417 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 DUSP9Q99956 384 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 CNNM2Q9H8M5 875 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 TNFRSF8P28908 595 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 EIF4A3P38919 411 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 KIF11P52732 1056 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 SF3A3Q12874 501 aaKnown RBP eCLIP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 IFT20Q8IY31 132 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 RNF26Q9BY78 433 aaPredicted RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 GDF3Q9NR23 364 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 AKAP11Q9UKA4 1901 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 MEGF6O75095 1541 aa18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-204ENST00000428730 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms