RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 KAZNQ674X7 775 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 GRAPLQ8TC17 118 aaPredicted RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 DESI2Q9BSY9 194 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 DISC1Q9NRI5 854 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CLIC2O15247 247 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 IFNB1P01574 187 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 ABI1Q8IZP0 508 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CCT6BQ92526 530 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 ZNF274Q96GC6 653 aaPredicted RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 RPS6KC1Q96S38 1066 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 AMNQ9BXJ7 453 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 TNNC2P02585 160 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CYP21A2P08686 494 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 TMEM191BP0C7N4 346 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 ADD2P35612 726 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 NDUFA8P51970 172 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 MORC3Q14149 939 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 ODR4Q5SWX8 454 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 IPO4Q8TEX9 1081 aaKnown RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 COPRSQ9NQ92 184 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 KDM3AQ9Y4C1 1321 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CYP19A1P11511 503 aaPredicted RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 STAT2P52630 851 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 MTERF2Q49AM1 385 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 C8orf74Q6P047 294 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CPLX4Q7Z7G2 160 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 RTKN2Q8IZC4 609 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 CCDC26Q8TAB7 109 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 ABCA6Q8N139 1617 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 TECPR2O15040 1411 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 KCNJ18B7U540 433 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 OPA1O60313 960 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 U2AF2P26368 475 aaKnown RBP eCLIP10.72□□□□□ -0.694e-6■■■■■ 30.3
SNX13-203ENST00000428135 PIK3CAP42336 1068 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 KCNJ12Q14500 433 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 LINC00116Q8NCU8 138 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 ZNF668Q96K58 619 aaPredicted RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 CARD6Q9BX69 1037 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 RABGAP1Q9Y3P9 1069 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 BMP3P12645 472 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 ZNF75DP51815 510 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 NR5A1Q13285 461 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PRAMEF18Q5VWM3 479 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 AIFM3Q96NN9 605 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 XPO4Q9C0E2 1151 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 GH2P01242 217 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 TMOD1P28289 359 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 POLR2FP61218 127 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 GOLGA8FQ08AF8 430 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 GOLGA8DPQ0D2H9 430 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 KRT81Q14533 505 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PPP2R5BQ15173 497 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 SLFN12Q8IYM2 578 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 TRIM7Q9C029 511 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 POLD4Q9HCU8 107 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 NUB1Q9Y5A7 615 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 RRP9O43818 475 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 PPP1R2P41236 205 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 RNASELQ05823 741 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 UBE3CQ15386 1083 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 ZMYM1Q5SVZ6 1142 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 TBCKQ8TEA7 893 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 NSRP1Q9H0G5 558 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 UTP11Q9Y3A2 253 aaKnown RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 ATF7P17544 494 aaPredicted RBP10.72□□□□□ -0.69
SNX13-203ENST00000428135 PRDX5P30044 214 aa10.72□□□□□ -0.69
SNX13-203ENST00000428135 HNRNPDLO14979 420 aaKnown RBP10.71□□□□□ -0.69
SNX13-203ENST00000428135 PFKFB2O60825 505 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 ITIH3Q06033 890 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 NOP9Q86U38 636 aaKnown RBP10.71□□□□□ -0.69
SNX13-203ENST00000428135 ZNF653Q96CK0 615 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 ECE2O60344 883 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 STK10O94804 968 aaKnown RBP10.71□□□□□ -0.69
SNX13-203ENST00000428135 SLC4A1P02730 911 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 SRGAP2CP0DJJ0 459 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 P4HA1P13674 534 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 TTLL11Q8NHH1 800 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 LSG1Q9H089 658 aaKnown RBP10.71□□□□□ -0.69
SNX13-203ENST00000428135 FAM49AQ9H0Q0 323 aaPredicted RBP10.71□□□□□ -0.69
SNX13-203ENST00000428135 NRBP2Q9NSY0 501 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 GLI2P10070 1586 aa10.71□□□□□ -0.69
SNX13-203ENST00000428135 DDAH1O94760 285 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms