RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CTR9Q6PD62 1173 aa22.26■■□□□ 1.15
CCDC47-202ENST00000403162 VPS18Q9P253 973 aa22.26■■□□□ 1.15
CCDC47-202ENST00000403162 REXO2Q9Y3B8 237 aaKnown RBP22.26■■□□□ 1.15
CCDC47-202ENST00000403162 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
CCDC47-202ENST00000403162 A0A1W2PQC6 194 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 ORC4O43929 436 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 MCM7P33993 719 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 PRCPP42785 496 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
CCDC47-202ENST00000403162 CASP8Q14790 479 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 PFKFB3Q16875 520 aaPredicted RBP22.25■■□□□ 1.15
CCDC47-202ENST00000403162 DNAJC7Q99615 494 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 LAMB1P07942 1786 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 PSMD14O00487 310 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 C21orf2O43822 256 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 ACTN2P35609 894 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 C15orf52Q6ZUT6 534 aaKnown RBP22.25■■□□□ 1.15
CCDC47-202ENST00000403162 TRAPPC11Q7Z392 1133 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 IRF2BP1Q8IU81 584 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 OR8K1Q8NGG5 319 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 C7orf43Q8WVR3 580 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 CHP1Q99653 195 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 HAUS4Q9H6D7 363 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 SUGCTQ9HAC7 445 aa22.25■■□□□ 1.15
CCDC47-202ENST00000403162 LTBP1Q14766 1721 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 PARP1P09874 1014 aaKnown RBP22.24■■□□□ 1.15
CCDC47-202ENST00000403162 WWC2Q6AWC2 1192 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 ADSSL1Q8N142 457 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 C4orf32Q8N8J7 132 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 NOA1Q8NC60 698 aaKnown RBP22.24■■□□□ 1.15
CCDC47-202ENST00000403162 PIM2Q9P1W9 311 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 GDAQ9Y2T3 454 aa22.24■■□□□ 1.15
CCDC47-202ENST00000403162 LGALS16A8MUM7 142 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 ZNF804AQ7Z570 1209 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 MB21D1Q8N884 522 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 FAM71BQ8TC56 605 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 TTC26A0AVF1 554 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 EEF1GP26641 437 aaKnown RBP22.23■■□□□ 1.15
CCDC47-202ENST00000403162 SEMA3FQ13275 785 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 ZNF662Q6ZS27 426 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 CCDC148Q8NFR7 591 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 ACBD3Q9H3P7 528 aa22.23■■□□□ 1.15
CCDC47-202ENST00000403162 RIMBP2O15034 1052 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 CALML3P27482 149 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 NCAPH2Q6IBW4 605 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 ZNF507Q8TCN5 953 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 PDS5AQ29RF7 1337 aaKnown RBP22.22■■□□□ 1.15
CCDC47-202ENST00000403162 KIAA1551Q9HCM1 1747 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 USP17L12C9JPN9 530 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 USP17L21D6R901 530 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 N4BP1O75113 896 aaKnown RBP22.22■■□□□ 1.15
CCDC47-202ENST00000403162 STAT6P42226 847 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 KCNB1Q14721 858 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 CC2D2BQ6DHV5 1058 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 THAP9Q9H5L6 903 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 DISC1Q9NRI5 854 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 CAPN11Q9UMQ6 739 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 GUCA1BQ9UMX6 200 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 FAN1Q9Y2M0 1017 aa22.22■■□□□ 1.15
CCDC47-202ENST00000403162 LUC7L2Q9Y383 392 aaKnown RBP22.22■■□□□ 1.15
CCDC47-202ENST00000403162 RPS6KA5O75582 802 aa22.21■■□□□ 1.15
CCDC47-202ENST00000403162 VIPAS39Q9H9C1 493 aa22.21■■□□□ 1.15
CCDC47-202ENST00000403162 MED4Q9NPJ6 270 aa22.21■■□□□ 1.15
CCDC47-202ENST00000403162 FEZ2Q9UHY8 353 aaPredicted RBP22.21■■□□□ 1.15
CCDC47-202ENST00000403162 MYL1P05976 194 aa22.21■■□□□ 1.15
CCDC47-202ENST00000403162 HSP90B2PQ58FF3 399 aa22.21■■□□□ 1.15
CCDC47-202ENST00000403162 ZC3H12CQ9C0D7 883 aaKnown RBP22.21■■□□□ 1.15
CCDC47-202ENST00000403162 ADAMTS3O15072 1205 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 MCM3P25205 808 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 USP14P54578 494 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
CCDC47-202ENST00000403162 TMED8Q6PL24 325 aaPredicted RBP22.2■■□□□ 1.14
CCDC47-202ENST00000403162 LEKR1Q6ZMV7 388 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 SH3GLB2Q9NR46 395 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 TRIM10Q9UDY6 481 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 MAPK8IP1Q9UQF2 711 aa22.2■■□□□ 1.14
CCDC47-202ENST00000403162 BAZ2BQ9UIF8 2168 aaKnown RBP22.2■■□□□ 1.14
CCDC47-202ENST00000403162 HERVK_113P62684 666 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 MEA1Q16626 185 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 PAPD7Q5XG87 772 aaKnown RBP22.19■■□□□ 1.14
CCDC47-202ENST00000403162 WDR59Q6PJI9 974 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 BLIDQ8IZY5 108 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 TRERF1Q96PN7 1200 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 EYA3Q99504 573 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 TRIM49BA6NDI0 452 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 NMT2O60551 498 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 IVLP07476 585 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
CCDC47-202ENST00000403162 KIF5BP33176 963 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 KRT83P78385 493 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 TSR1Q2NL82 804 aaKnown RBP22.19■■□□□ 1.14
CCDC47-202ENST00000403162 NAALADL2Q58DX5 795 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 EHBP1Q8NDI1 1231 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 RPGRIP1Q96KN7 1286 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 CD209Q9NNX6 404 aa22.19■■□□□ 1.14
CCDC47-202ENST00000403162 LRRIQ3A6PVS8 624 aaPredicted RBP22.18■■□□□ 1.14
CCDC47-202ENST00000403162 STIM1Q13586 685 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 NOC3LQ8WTT2 800 aaKnown RBP22.18■■□□□ 1.14
CCDC47-202ENST00000403162 KLRC4O43908 158 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms