RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
TUBE1-202ENST00000368662 TLL2Q9Y6L7 1015 aa14.1□□□□□ -0.15
TUBE1-202ENST00000368662 SPDYE16A6NNV3 312 aaPredicted RBP14.09□□□□□ -0.15
TUBE1-202ENST00000368662 ATP2A1O14983 1001 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 ZNF157P51786 506 aaPredicted RBP14.09□□□□□ -0.15
TUBE1-202ENST00000368662 RGMBQ6NW40 437 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 ZNF536O15090 1300 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 PARP14Q460N5 1801 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 CCL15-CCL14A0A0B4J2E2 113 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 TMEM88BA6NKF7 163 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 NFKBIBQ15653 356 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 CCL15Q16663 113 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 SAMD3Q8N6K7 520 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 ZNF784Q8NCA9 323 aaPredicted RBP14.09□□□□□ -0.15
TUBE1-202ENST00000368662 GTF3C2Q8WUA4 911 aaPredicted RBP14.09□□□□□ -0.15
TUBE1-202ENST00000368662 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
TUBE1-202ENST00000368662 AP3B2Q13367 1082 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 PIK3AP1Q6ZUJ8 805 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 MCF2L2Q86YR7 1114 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 CPXCR1Q8N123 301 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 TMEM87AQ8NBN3 555 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 REPS2Q8NFH8 660 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 MAF1Q9H063 256 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 ASCC2Q9H1I8 757 aaPredicted RBP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 RTEL1Q9NZ71 1219 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 CNPY2Q9Y2B0 182 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 RLFQ13129 1914 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 FOSP01100 380 aaPredicted RBP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 CLK2P49760 499 aaKnown RBP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 TKFCQ3LXA3 575 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 GPAT2Q6NUI2 795 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 ANKRD23Q86SG2 305 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 RASAL3Q86YV0 1011 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
TUBE1-202ENST00000368662 RAVER2Q9HCJ3 691 aaKnown RBP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
TUBE1-202ENST00000368662 MYH15Q9Y2K3 1946 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 ELP1O95163 1332 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 FIBPO43427 364 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 YEATS4O95619 227 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 HERVK_113P62684 666 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 SPATA32Q96LK8 384 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 P2RX7Q99572 595 aaKnown RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 TFIP11Q9UBB9 837 aaKnown RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 BIN2Q9UBW5 565 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 ZNF214Q9UL59 606 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
TUBE1-202ENST00000368662 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
TUBE1-202ENST00000368662 MEIS2O14770 477 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 BMP15O95972 392 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 TMEM132BQ14DG7 1078 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 ANO1Q5XXA6 986 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 BRI3BPQ8WY22 251 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 TESPA1A2RU30 521 aaPredicted RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 MANSC4A6NHS7 340 aaPredicted RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 GCOM1H8Y6P7 765 aaPredicted RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 SLC10A3P09131 477 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 POLR2MP0CAP2 368 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 ALAS1P13196 640 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 STAT3P40763 770 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 INHBEP58166 350 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 MKRN3Q13064 507 aaKnown RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
TUBE1-202ENST00000368662 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 RCOR1Q9UKL0 485 aa14.06□□□□□ -0.16
TUBE1-202ENST00000368662 OPLAHO14841 1288 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 COPB2P35606 906 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 TOB1P50616 345 aaPredicted RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 GHRHRQ02643 423 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 CEBPZQ03701 1054 aaKnown RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 UBE2SQ16763 222 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 USP17L6PQ6QN14 398 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 LEO1Q8WVC0 666 aaPredicted RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 TRERF1Q96PN7 1200 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 ZCCHC17Q9NP64 241 aaKnown RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 RABGAP1Q9Y3P9 1069 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 TCHHQ07283 1943 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 PDHXO00330 501 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 ADAMTS3O15072 1205 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 CFBP00751 764 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 STK38Q15208 465 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 SF3A1Q15459 793 aaKnown RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 TTC38Q5R3I4 469 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms