RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 USP17L4A6NCW7 530 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 CYLC1P35663 651 aaPredicted RBP25.09■■□□□ 1.61
CCSER2-202ENST00000359979 HERVK_113P62684 666 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 COBLL1Q53SF7 1204 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 RC3H1Q5TC82 1133 aaKnown RBP25.09■■□□□ 1.61
CCSER2-202ENST00000359979 TPTE2Q6XPS3 522 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 USP17L1Q7RTZ2 530 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 CABP7Q86V35 215 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 CCDC170Q8IYT3 715 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 CSGALNACT2Q8N6G5 542 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 SH3RF3Q8TEJ3 882 aaPredicted RBP25.09■■□□□ 1.61
CCSER2-202ENST00000359979 P2RX5Q93086 422 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 C7orf25Q9BPX7 421 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 ADAM21Q9UKJ8 722 aa25.09■■□□□ 1.61
CCSER2-202ENST00000359979 OR52Z1P0C646 297 aa25.08■■□□□ 1.61
CCSER2-202ENST00000359979 HNRNPH2P55795 449 aaKnown RBP25.08■■□□□ 1.61
CCSER2-202ENST00000359979 MUM1L1Q5H9M0 696 aa25.08■■□□□ 1.61
CCSER2-202ENST00000359979 PAPD7Q5XG87 772 aaKnown RBP25.08■■□□□ 1.61
CCSER2-202ENST00000359979 RPGRIP1Q96KN7 1286 aa25.08■■□□□ 1.61
CCSER2-202ENST00000359979 TMEM47Q9BQJ4 181 aa25.08■■□□□ 1.61
CCSER2-202ENST00000359979 ZNF287Q9HBT7 754 aa25.08■■□□□ 1.61
CCSER2-202ENST00000359979 ZNHIT6Q9NWK9 470 aaKnown RBP25.08■■□□□ 1.61
CCSER2-202ENST00000359979 PES1O00541 588 aaKnown RBP25.08■■□□□ 1.6
CCSER2-202ENST00000359979 TFRCP02786 760 aaKnown RBP25.08■■□□□ 1.6
CCSER2-202ENST00000359979 TM4SF1P30408 202 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 ORC2Q13416 577 aaPredicted RBP25.08■■□□□ 1.6
CCSER2-202ENST00000359979 MCM6Q14566 821 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 CERS3Q8IU89 383 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 IQCDQ96DY2 449 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 TRIM9Q9C026 710 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 PDE11AQ9HCR9 933 aa25.08■■□□□ 1.6
CCSER2-202ENST00000359979 B4DLN1 442 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 KRT86O43790 486 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 PLCG1P19174 1290 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 MCM3P25205 808 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 ZBED6P86452 979 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 SLC4A8Q2Y0W8 1093 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 FIGNQ5HY92 759 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 CCDC122Q5T0U0 273 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 NOA1Q8NC60 698 aaKnown RBP25.07■■□□□ 1.6
CCSER2-202ENST00000359979 NEK11Q8NG66 645 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 LRRC15Q8TF66 581 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 TRIM10Q9UDY6 481 aa25.07■■□□□ 1.6
CCSER2-202ENST00000359979 CDK17Q00537 523 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 AMPD3Q01432 767 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 NCAPH2Q6IBW4 605 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 JAG2Q9Y219 1238 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 SAR1BQ9Y6B6 198 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 A0A1W2PQJ5 194 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 EIF3CLB5ME19 914 aaKnown RBP25.06■■□□□ 1.6
CCSER2-202ENST00000359979 RPS6KA4O75676 772 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 TRIM21P19474 475 aaKnown RBP25.06■■□□□ 1.6
CCSER2-202ENST00000359979 SMARCA1P28370 1054 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 GNA11P29992 359 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 CASP8Q14790 479 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 NONOQ15233 471 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCSER2-202ENST00000359979 ZSCAN29Q8IWY8 852 aaPredicted RBP25.06■■□□□ 1.6
CCSER2-202ENST00000359979 EIF3CQ99613 913 aaKnown RBP25.06■■□□□ 1.6
CCSER2-202ENST00000359979 LEMD3Q9Y2U8 911 aa25.06■■□□□ 1.6
CCSER2-202ENST00000359979 LDHCP07864 332 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 RASA1P20936 1047 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 PDE4DQ08499 809 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 TXNRD1Q16881 649 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 PLIN2Q99541 437 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 ACBD3Q9H3P7 528 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 C6orf50Q9HD87 102 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 STX8Q9UNK0 236 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 KLRF2D3W0D1 207 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 IPO7O95373 1038 aaKnown RBP25.05■■□□□ 1.6
CCSER2-202ENST00000359979 CKAP4Q07065 602 aaKnown RBP25.05■■□□□ 1.6
CCSER2-202ENST00000359979 TBC1D8BQ0IIM8 1120 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 KIAA1328Q86T90 577 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 JAKMIP2Q96AA8 810 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 CNOT6LQ96LI5 555 aaKnown RBP25.05■■□□□ 1.6
CCSER2-202ENST00000359979 ERGIC2Q96RQ1 377 aa25.05■■□□□ 1.6
CCSER2-202ENST00000359979 USP14P54578 494 aa25.04■■□□□ 1.6
CCSER2-202ENST00000359979 NAPAP54920 295 aa25.04■■□□□ 1.6
CCSER2-202ENST00000359979 ANKRD40Q6AI12 368 aa25.04■■□□□ 1.6
CCSER2-202ENST00000359979 NAV1Q8NEY1 1877 aa25.04■■□□□ 1.6
CCSER2-202ENST00000359979 ANO9A1A5B4 782 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 RASSF10A6NK89 507 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 ZPR1O75312 459 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 CNNM4Q6P4Q7 775 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 NEK8Q86SG6 692 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 TGFBRAP1Q8WUH2 860 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 VIPAS39Q9H9C1 493 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 NHEJ1Q9H9Q4 299 aaPredicted RBP25.03■■□□□ 1.6
CCSER2-202ENST00000359979 AGPAT5Q9NUQ2 364 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 TARSL2A2RTX5 802 aaKnown RBP25.03■■□□□ 1.6
CCSER2-202ENST00000359979 CCNT1O60563 726 aaKnown RBP25.03■■□□□ 1.6
CCSER2-202ENST00000359979 ATP1A1P05023 1023 aaKnown RBP25.03■■□□□ 1.6
CCSER2-202ENST00000359979 ASIC1P78348 528 aa25.03■■□□□ 1.6
CCSER2-202ENST00000359979 SRP68Q9UHB9 627 aaKnown RBP25.03■■□□□ 1.6
CCSER2-202ENST00000359979 STK4Q13043 487 aa25.02■■□□□ 1.6
CCSER2-202ENST00000359979 LETM2Q2VYF4 491 aa25.02■■□□□ 1.6
CCSER2-202ENST00000359979 FAM71BQ8TC56 605 aa25.02■■□□□ 1.6
CCSER2-202ENST00000359979 C8orf37Q96NL8 207 aa25.02■■□□□ 1.6
CCSER2-202ENST00000359979 PURBQ96QR8 312 aaKnown RBP25.02■■□□□ 1.6
CCSER2-202ENST00000359979 MYH1P12882 1939 aa25.02■■□□□ 1.6
CCSER2-202ENST00000359979 SMCO2A6NFE2 343 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms