RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 IKBKGQ9Y6K9 419 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 UBN2Q6ZU65 1347 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L15C9J2P7 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L13C9JLJ4 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L11C9JVI0 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L18D6R9N7 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L22D6RA61 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L17D6RBQ6 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L19D6RCP7 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L20D6RJB6 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 NTSR2O95665 410 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 FOXO4P98177 505 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 USP17L24Q0WX57 530 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 MTERF2Q49AM1 385 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 RMDN3Q96TC7 470 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 XPOTO43592 962 aaKnown RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 YWHAEP62258 255 aaKnown RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 KIF5AQ12840 1032 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 BIRC2Q13490 618 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 UBE2SQ16763 222 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 LIN9Q5TKA1 542 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 SELENOOQ9BVL4 669 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 DCP1AQ9NPI6 582 aaPredicted RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 ZNF70Q9UC06 446 aaPredicted RBP10.77□□□□□ -0.68
GABPA-201ENST00000354828 TPCN1Q9ULQ1 816 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 KIAA1024Q9UPX6 916 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.68
GABPA-201ENST00000354828 ZNF202O95125 648 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 VEGFAP15692 232 aaPredicted RBP10.77□□□□□ -0.69
GABPA-201ENST00000354828 ARL1P40616 181 aaPredicted RBP10.77□□□□□ -0.69
GABPA-201ENST00000354828 GNG11P61952 73 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 MYL5Q02045 173 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 DGKHQ86XP1 1220 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.69
GABPA-201ENST00000354828 ST7Q9NRC1 585 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.69
GABPA-201ENST00000354828 TACC1O75410 805 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 PSAPP07602 524 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 STAT3P40763 770 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 CCDC91Q7Z6B0 441 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 TBCKQ8TEA7 893 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
GABPA-201ENST00000354828 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
GABPA-201ENST00000354828 LRMPQ12912 555 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 KRT83P78385 493 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 MTMR2Q13614 643 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 NACC1Q96RE7 527 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 GBP3Q9H0R5 595 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 CCL15-CCL14A0A0B4J2E2 113 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 DLATP10515 647 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 GNAT1P11488 350 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 PTGDRQ13258 359 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 CCL15Q16663 113 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 ARMCX5Q6P1M9 558 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 PRPF38AQ8NAV1 312 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 RPAP3Q9H6T3 665 aaPredicted RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 DAGLAQ9Y4D2 1042 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 TLR3O15455 904 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 EPHX2P34913 555 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 SREBF2Q12772 1141 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 INTS5Q6P9B9 1019 aaKnown RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 LEO1Q8WVC0 666 aaPredicted RBP10.76□□□□□ -0.69
GABPA-201ENST00000354828 POMGNT1Q8WZA1 660 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 C3P01024 1663 aa10.76□□□□□ -0.69
GABPA-201ENST00000354828 F5H6K3 240 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
GABPA-201ENST00000354828 KLRC3Q07444 240 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 POSTNQ15063 836 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 VWA3BQ502W6 1294 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 RCSD1Q6JBY9 416 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 DCUN1D2Q6PH85 259 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
GABPA-201ENST00000354828 CCDC127Q96BQ5 260 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 RASSF7Q02833 373 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
GABPA-201ENST00000354828 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 IFNKQ9P0W0 207 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 SERTAD1Q9UHV2 236 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 SYNRGQ9UMZ2 1314 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
GABPA-201ENST00000354828 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 MYOCDQ8IZQ8 938 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 NSUN6Q8TEA1 469 aaKnown RBP10.75□□□□□ -0.69
GABPA-201ENST00000354828 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
GABPA-201ENST00000354828 BCRP11274 1271 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms