RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 TRIM10Q9UDY6 481 aa24.07■■□□□ 1.44
PTDSS1-201ENST00000337004 SRP68Q9UHB9 627 aaKnown RBP24.07■■□□□ 1.44
PTDSS1-201ENST00000337004 ADAM21Q9UKJ8 722 aa24.07■■□□□ 1.44
PTDSS1-201ENST00000337004 BAZ2BQ9UIF8 2168 aaKnown RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 KLRF2D3W0D1 207 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 H3BQF6 201 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 LDHCP07864 332 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 TM4SF1P30408 202 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 PDE4DQ08499 809 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 DUSP9Q99956 384 aaKnown RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 PDE11AQ9HCR9 933 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 KRT86O43790 486 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 CCNT1O60563 726 aaKnown RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 GNA11P29992 359 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 NAPAP54920 295 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 HNRNPH2P55795 449 aaKnown RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 AMPD3Q01432 767 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 TBC1D8BQ0IIM8 1120 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 NONOQ15233 471 aaKnown RBP eCLIP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 NCAPH2Q6IBW4 605 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 C7orf25Q9BPX7 421 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 SPZ1Q9BXG8 430 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 TRIM9Q9C026 710 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 PSD3Q9NYI0 1048 aa24.06■■□□□ 1.44
PTDSS1-201ENST00000337004 MYH13Q9UKX3 1938 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 IPO7O95373 1038 aaKnown RBP24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 HERVK_113P62684 666 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 TXNRD1Q16881 649 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 LETM2Q2VYF4 491 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 KIAA1328Q86T90 577 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 NEK11Q8NG66 645 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 C6orf50Q9HD87 102 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 GOLGA8HP0CJ92 632 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 WDR93Q6P2C0 686 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 CCDC170Q8IYT3 715 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 NOA1Q8NC60 698 aaKnown RBP24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 LEMD3Q9Y2U8 911 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 SAR1BQ9Y6B6 198 aa24.05■■□□□ 1.44
PTDSS1-201ENST00000337004 FLT1P17948 1338 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 RASA1P20936 1047 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 ASIC1P78348 528 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 ZBED6P86452 979 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 DIXDC1Q155Q3 683 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 SLC44A5Q8NCS7 719 aa24.04■■□□□ 1.44
PTDSS1-201ENST00000337004 SMCO2A6NFE2 343 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 ANKRD40Q6AI12 368 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 LRRC15Q8TF66 581 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 TTYH3Q9C0H2 523 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 AGPAT5Q9NUQ2 364 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 MAST2Q6P0Q8 1798 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 SOGA3Q5TF21 947 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 PAPD7Q5XG87 772 aaKnown RBP24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 NEK8Q86SG6 692 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 CERS3Q8IU89 383 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 JAKMIP2Q96AA8 810 aa24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 CNOT6LQ96LI5 555 aaKnown RBP24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 PCMTD1Q96MG8 357 aaPredicted RBP24.03■■□□□ 1.44
PTDSS1-201ENST00000337004 ENC1O14682 589 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 MCM3P25205 808 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 MTIF2P46199 727 aaKnown RBP24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 STK4Q13043 487 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 CASP8Q14790 479 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 RRP36Q96EU6 259 aaKnown RBP24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 NHEJ1Q9H9Q4 299 aaPredicted RBP24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 CNNM4Q6P4Q7 775 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 MAPKAPK5Q8IW41 473 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 RPGRIP1Q96KN7 1286 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 NOC4LQ9BVI4 516 aaKnown RBP24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 ACBD3Q9H3P7 528 aa24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 SAP30BPQ9UHR5 308 aaKnown RBP24.02■■□□□ 1.44
PTDSS1-201ENST00000337004 EIF3CLB5ME19 914 aaKnown RBP24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 GYS2P54840 703 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 ZNF804AQ7Z570 1209 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 EIF3CQ99613 913 aaKnown RBP24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 SUGCTQ9HAC7 445 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 SEC63Q9UGP8 760 aaKnown RBP24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 GNPATO15228 680 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 ATP1A1P05023 1023 aaKnown RBP24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 TECP42680 631 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 FKBP15Q5T1M5 1219 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 IQCDQ96DY2 449 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 CALML4Q96GE6 196 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 EYA3Q99504 573 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 VPS18Q9P253 973 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 HDAC6Q9UBN7 1215 aa24.01■■□□□ 1.43
PTDSS1-201ENST00000337004 NUTM2BA6NNL0 878 aaPredicted RBP24■■□□□ 1.43
PTDSS1-201ENST00000337004 NUTM2EB1AL46 878 aaPredicted RBP24■■□□□ 1.43
PTDSS1-201ENST00000337004 CKAP4Q07065 602 aaKnown RBP24■■□□□ 1.43
PTDSS1-201ENST00000337004 ORC2Q13416 577 aaPredicted RBP24■■□□□ 1.43
PTDSS1-201ENST00000337004 COBLL1Q53SF7 1204 aa24■■□□□ 1.43
PTDSS1-201ENST00000337004 HSP90B2PQ58FF3 399 aa24■■□□□ 1.43
PTDSS1-201ENST00000337004 FIGNQ5HY92 759 aa24■■□□□ 1.43
PTDSS1-201ENST00000337004 NRAPQ86VF7 1730 aa24■■□□□ 1.43
PTDSS1-201ENST00000337004 A0A1W2PQJ5 194 aa24■■□□□ 1.43
PTDSS1-201ENST00000337004 SMARCA1P28370 1054 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms