RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MLXIPLQ9NP71 852 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 FPGT-TNNI3KV9GXZ4 949 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 LPXNO60711 386 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 PLS3P13797 630 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TSPY1Q01534 308 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 CCDC92Q53HC0 331 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 TTBK2Q6IQ55 1244 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 CROCCP2Q86T23 111 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 EFCAB13Q8IY85 973 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 PFKFB1P16118 471 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 CABP7Q86V35 215 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 MLKLQ8NB16 471 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ABCC1P33527 1531 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 IGBP1P78318 339 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TCP11X2Q5H9J9 407 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 KRT40Q6A162 431 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TXLNGQ9NUQ3 528 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 GGA1Q9UJY5 639 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ATP8A1Q9Y2Q0 1164 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 A0A087WUV0 522 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 H0Y3Z8 333 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 EEF1GP26641 437 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 Q3C1V9 767 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 LINS1Q8NG48 757 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 GPKOWQ92917 476 aaPredicted RBP eCLIP8.62□□□□□ -1.03
CIITA-201ENST00000324288 SH2D4AQ9H788 454 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 EPB41L5Q9HCM4 733 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 INTS9Q9NV88 658 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 MAD1L1Q9Y6D9 718 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 CCNL1Q9UK58 526 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 DENND2AQ9ULE3 1009 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 EFCAB8A8MWE9 144 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 K7ENM7 598 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 BCRP11274 1271 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ECE1P42892 770 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 GSPT2Q8IYD1 628 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 ANGPTL2Q9UKU9 493 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ZNF500O60304 480 aaPredicted RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 HIBADHP31937 336 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 NNTQ13423 1086 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 REXO1Q8N1G1 1221 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 SPAG17Q6Q759 2223 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TTC4O95801 387 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ETF1P62495 437 aaKnown RBP8.62□□□□□ -1.03
CIITA-201ENST00000324288 ACRBPQ8NEB7 543 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TTLL11Q8NHH1 800 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 FBXO41Q8TF61 875 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 TECP42680 631 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 SUGCTQ9HAC7 445 aa8.62□□□□□ -1.03
CIITA-201ENST00000324288 ZBED4O75132 1171 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ZFXP17010 805 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 HIBCHQ6NVY1 386 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 TOP2BQ02880 1626 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 PLB1Q6P1J6 1458 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 PDCD2Q16342 344 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 TRIM56Q9BRZ2 755 aaKnown RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 TBK1Q9UHD2 729 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 MTMR6Q9Y217 621 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 CAPN9O14815 690 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 PHBP35232 272 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 DNM2P50570 870 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 TMTC3Q6ZXV5 915 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ST13P4Q8IZP2 240 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ARHGEF16Q5VV41 709 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 GRAMD4Q6IC98 578 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 GABPB2Q8TAK5 448 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 OLA1Q9NTK5 396 aaKnown RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 MESDQ14696 234 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 MAGOHBQ96A72 148 aaKnown RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 SUPT3HO75486 399 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 IL9RQ01113 521 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 LRRC8AQ8IWT6 810 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 SMCR8Q8TEV9 937 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 FLOT2Q14254 428 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ANKRD20A4Q4UJ75 823 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ANKRD20A8PQ5CZ79 823 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ANKRD20A2Q5SQ80 823 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 ANKRD20A1Q5TYW2 823 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 RFX8Q6ZV50 586 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 KLHL29Q96CT2 875 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 LLPHQ9BRT6 129 aaKnown RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 DCTPP1Q9H773 170 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 FAM47EQ6ZV65 393 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 DNAJC6O75061 913 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 PNMA6AP0CW24 399 aaPredicted RBP8.61□□□□□ -1.03
CIITA-201ENST00000324288 KRT80Q6KB66 452 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 CCDC127Q96BQ5 260 aa8.61□□□□□ -1.03
CIITA-201ENST00000324288 DRC3Q9H069 523 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms