RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 JRKLQ9Y4A0 524 aa15.46■□□□□ 0.07
MKS1-201ENST00000313863 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.06
MKS1-201ENST00000313863 PRLRP16471 622 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 COBLL1Q53SF7 1204 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
MKS1-201ENST00000313863 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 CCDC42Q96M95 316 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 DCP1AQ9NPI6 582 aaPredicted RBP15.45■□□□□ 0.06
MKS1-201ENST00000313863 LCMT1Q9UIC8 334 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 FAM184BQ9ULE4 1060 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 A6NNZ2 444 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 TUBB8Q3ZCM7 444 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
MKS1-201ENST00000313863 FAM76AQ8TAV0 307 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 PPM1EQ8WY54 764 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 LZTS2Q9BRK4 669 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 JADE2Q9NQC1 790 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 RSPH14Q9UHP6 348 aa15.45■□□□□ 0.06
MKS1-201ENST00000313863 VGLL3A8MV65 326 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 SMIM22K7EJ46 135 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 ADAMTS2O95450 1211 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 FGFR1OPO95684 399 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 PMS1P54277 932 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 GRM4Q14833 912 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 DNAJC21Q5F1R6 531 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 FAM47AQ5JRC9 791 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 ZSCAN29Q8IWY8 852 aaPredicted RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 NSUN4Q96CB9 384 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 CNOT6LQ96LI5 555 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 ALS2CR12Q96Q35 445 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 DUSP9Q99956 384 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 NOC4LQ9BVI4 516 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 BTG4Q9NY30 223 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 GOLGA6BA6NDN3 693 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 M0R2N6 131 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 TRIM66O15016 1216 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 HNRNPH3P31942 346 aaKnown RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 CORO7P57737 925 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 ORC2Q13416 577 aaPredicted RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 CCDC155Q8N6L0 562 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 C7orf25Q9BPX7 421 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
MKS1-201ENST00000313863 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
MKS1-201ENST00000313863 ABCB11O95342 1321 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 OPA1O60313 960 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 NMT2O60551 498 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 SHOX2O60902 331 aaPredicted RBP15.43■□□□□ 0.06
MKS1-201ENST00000313863 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 TCP1P17987 556 aaKnown RBP15.43■□□□□ 0.06
MKS1-201ENST00000313863 PDE4DQ08499 809 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 SF3B3Q15393 1217 aaKnown RBP15.43■□□□□ 0.06
MKS1-201ENST00000313863 CABP7Q86V35 215 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 FAM84BQ96KN1 310 aaPredicted RBP15.43■□□□□ 0.06
MKS1-201ENST00000313863 PCDHA6Q9UN73 950 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 PCDHA8Q9Y5H6 950 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
MKS1-201ENST00000313863 GOLGA8KD6RF30 607 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 MECOMQ03112 1051 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 FBXO33Q7Z6M2 555 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
MKS1-201ENST00000313863 EFCAB13Q8IY85 973 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 AENQ8WTP8 325 aaKnown RBP15.42■□□□□ 0.06
MKS1-201ENST00000313863 LACRTQ9GZZ8 138 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 AGPAT5Q9NUQ2 364 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 ZC3H4Q9UPT8 1303 aaKnown RBP15.42■□□□□ 0.06
MKS1-201ENST00000313863 GOLGA6CA6NDK9 693 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 OR52Z1P0C646 297 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 GGCXP38435 758 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 ASIC1P78348 528 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 PPFIA1Q13136 1202 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
MKS1-201ENST00000313863 SPTY2D1Q68D10 685 aaPredicted RBP15.42■□□□□ 0.06
MKS1-201ENST00000313863 KRT25Q7Z3Z0 450 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 GPKOWQ92917 476 aaPredicted RBP eCLIP15.42■□□□□ 0.06
MKS1-201ENST00000313863 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 BARHL2Q9NY43 387 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
MKS1-201ENST00000313863 MYH10P35580 1976 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 INF2Q27J81 1249 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 ANKRD40Q6AI12 368 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 CLEC4GQ6UXB4 293 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 ZNF384Q8TF68 577 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 IFIH1Q9BYX4 1025 aaKnown RBP15.41■□□□□ 0.06
MKS1-201ENST00000313863 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 TSKSQ9UJT2 592 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 HYOU1Q9Y4L1 999 aa15.41■□□□□ 0.06
MKS1-201ENST00000313863 MACROD2A1Z1Q3 448 aa15.4■□□□□ 0.06
MKS1-201ENST00000313863 CLSTN1O94985 981 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms