RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 STK4Q13043 487 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
HIF3A-204ENST00000300862 TTI2Q6NXR4 508 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 C16orf86Q6ZW13 317 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 GIMAP8Q8ND71 665 aaPredicted RBP14.47□□□□□ -0.09
HIF3A-204ENST00000300862 TBCKQ8TEA7 893 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 TRERF1Q96PN7 1200 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 ZCCHC17Q9NP64 241 aaKnown RBP14.47□□□□□ -0.09
HIF3A-204ENST00000300862 LRRC4BQ9NT99 713 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 CDC23Q9UJX2 597 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 TTF2Q9UNY4 1162 aaKnown RBP14.47□□□□□ -0.09
HIF3A-204ENST00000300862 REXO2Q9Y3B8 237 aaKnown RBP14.47□□□□□ -0.09
HIF3A-204ENST00000300862 COL24A1Q17RW2 1714 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 BTAF1O14981 1849 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
HIF3A-204ENST00000300862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 ASIC1P78348 528 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 PDE4DQ08499 809 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 PICALMQ13492 652 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 SRGAP1Q7Z6B7 1085 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 CSGALNACT2Q8N6G5 542 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 NEDD1Q8NHV4 660 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 DUSP9Q99956 384 aaKnown RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 GUCA1BQ9UMX6 200 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 GPR75-ASB3A0A0A6YYF3 556 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 F8W031 263 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 TXKP42681 527 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 RHBDL3P58872 404 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 ST5P78524 1137 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 KCNB1Q14721 858 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 ANKRD40Q6AI12 368 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 GALNT17Q6IS24 598 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 LRRC47Q8N1G4 583 aaKnown RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 COA7Q96BR5 231 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 RRP36Q96EU6 259 aaKnown RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 TRIM9Q9C026 710 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 AGPAT5Q9NUQ2 364 aa14.46□□□□□ -0.09
HIF3A-204ENST00000300862 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 EPN1Q9Y6I3 576 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-204ENST00000300862 SBF2Q86WG5 1849 aa14.46□□□□□ -0.1
HIF3A-204ENST00000300862 STIM1Q13586 685 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 TMED8Q6PL24 325 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-204ENST00000300862 NEK8Q86SG6 692 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 C6orf50Q9HD87 102 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 ARFGAP3Q9NP61 516 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-204ENST00000300862 POLLQ9UGP5 575 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 GGA1Q9UJY5 639 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 USP21Q9UK80 565 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
HIF3A-204ENST00000300862 NDUFA10O95299 355 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 RHOXF2BP0C7M4 288 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 SLC20A2Q08357 652 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 KRT25Q7Z3Z0 450 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 GPIHBP1Q8IV16 184 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 OR8K1Q8NGG5 319 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 ZNF507Q8TCN5 953 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 RHOXF2Q9BQY4 288 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 TUBGCP2Q9BSJ2 902 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 MMTAG2Q9BU76 263 aaKnown RBP14.45□□□□□ -0.1
HIF3A-204ENST00000300862 ZNF287Q9HBT7 754 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 EXOC1Q9NV70 894 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 ZNF831Q5JPB2 1677 aa14.45□□□□□ -0.1
HIF3A-204ENST00000300862 C6orf229H3BNL8 230 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 ENC1O14682 589 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 ERCC3P19447 782 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 PRPHP41219 470 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 RAD51AP2Q09MP3 1159 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 TRIM14Q14142 442 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 WDR59Q6PJI9 974 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 UIMC1Q96RL1 719 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 PNKPQ96T60 521 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 NAPGQ99747 312 aaPredicted RBP14.44□□□□□ -0.1
HIF3A-204ENST00000300862 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 ANKZF1Q9H8Y5 726 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 LAD1O00515 517 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 RIMBP2O15034 1052 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 OAS2P29728 719 aaKnown RBP14.44□□□□□ -0.1
HIF3A-204ENST00000300862 NCAPH2Q6IBW4 605 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 THAP9Q9H5L6 903 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 SLC39A2Q9NP94 309 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
HIF3A-204ENST00000300862 BCCIPQ9P287 314 aaKnown RBP eCLIP14.44□□□□□ -0.1
HIF3A-204ENST00000300862 RASSF10A6NK89 507 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 EEF1GP26641 437 aaKnown RBP14.43□□□□□ -0.1
HIF3A-204ENST00000300862 GNA11P29992 359 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 GTF2IP78347 998 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 REXO1Q8N1G1 1221 aaKnown RBP14.43□□□□□ -0.1
HIF3A-204ENST00000300862 P2RX5Q93086 422 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 PCMTD1Q96MG8 357 aaPredicted RBP14.43□□□□□ -0.1
HIF3A-204ENST00000300862 HDAC6Q9UBN7 1215 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 NAV1Q8NEY1 1877 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 TOM1O60784 492 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 TDP2O95551 362 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms