RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TRPC6Q9Y210 931 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
SSRP1-202ENST00000293880 CFAP36Q96G28 342 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 NUB1Q9Y5A7 615 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 CAPN9O14815 690 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 RANBP1P43487 201 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 DYNLT1P63172 113 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 MESDQ14696 234 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 OR8K1Q8NGG5 319 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 FAN1Q9Y2M0 1017 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 WDR91A4D1P6 747 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
SSRP1-202ENST00000293880 MRPS25P82663 173 aaKnown RBP17.62■□□□□ 0.41
SSRP1-202ENST00000293880 OTUD6AQ7L8S5 288 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 PPM1KQ8N3J5 372 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 PAGR1Q9BTK6 254 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSRP1-202ENST00000293880 IBTKQ9P2D0 1353 aaPredicted RBP17.62■□□□□ 0.41
SSRP1-202ENST00000293880 DMTNQ08495 405 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 ZNF654Q8IZM8 581 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 CCDC127Q96BQ5 260 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 GNA14O95837 355 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 DNM2P50570 870 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 PIP4K2CQ8TBX8 421 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 SLC8A1P32418 973 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 BFSP1Q12934 665 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 TMTC4Q5T4D3 741 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 MYSM1Q5VVJ2 828 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 THOC1Q96FV9 657 aaKnown RBP17.62■□□□□ 0.41
SSRP1-202ENST00000293880 PCDHA7Q9UN72 937 aa17.62■□□□□ 0.41
SSRP1-202ENST00000293880 H7C0C1 242 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 ATP5OP48047 213 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 SLC7A5Q01650 507 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 TCP11Q8WWU5 503 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 BRD1O95696 1058 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 GLG1Q92896 1179 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 KRT10P13645 584 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 ZNF148Q9UQR1 794 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 NOSTRINQ8IVI9 506 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
SSRP1-202ENST00000293880 METTL14Q9HCE5 456 aaKnown RBP17.61■□□□□ 0.41
SSRP1-202ENST00000293880 GYS2P54840 703 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 XKR9Q5GH70 373 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 CCNL1Q9UK58 526 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-202ENST00000293880 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 MYL7Q01449 175 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 LRRC41Q15345 812 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 ANKRD65E5RJM6 399 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
SSRP1-202ENST00000293880 Q9H521 79 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 HOMER3Q9NSC5 361 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
SSRP1-202ENST00000293880 C11orf57Q6ZUT1 292 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-202ENST00000293880 LPIN2Q92539 896 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 AOX1Q06278 1338 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 TCP10L2B9ZVM9 353 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 SCNN1DP51172 638 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 SCRN1Q12765 414 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 EPB41L5Q9HCM4 733 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
SSRP1-202ENST00000293880 KDM3AQ9Y4C1 1321 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 M0QZ92 97 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 LUC7L3O95232 432 aaKnown RBP17.59■□□□□ 0.41
SSRP1-202ENST00000293880 TMOD1P28289 359 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ACRBPQ8NEB7 543 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
SSRP1-202ENST00000293880 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ADAM9Q13443 819 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 FTCDO95954 541 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 HADHQ16836 314 aaKnown RBP17.59■□□□□ 0.41
SSRP1-202ENST00000293880 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 PTPRKQ15262 1439 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ADCY9O60503 1353 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 P4HA1P13674 534 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 CEP70Q8NHQ1 597 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ATP8A1Q9Y2Q0 1164 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 CYP4A11Q02928 519 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 CCDC84Q86UT8 332 aaPredicted RBP17.59■□□□□ 0.41
SSRP1-202ENST00000293880 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 C1orf112Q9NSG2 853 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 BCAP29Q9UHQ4 241 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
SSRP1-202ENST00000293880 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.41
SSRP1-202ENST00000293880 DISC1Q9NRI5 854 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 DNAJC17Q9NVM6 304 aaKnown RBP17.58■□□□□ 0.41
SSRP1-202ENST00000293880 STK32BQ9NY57 414 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms