RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 PPATQ06203 517 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 C2orf69Q8N8R5 385 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 ZNF536O15090 1300 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 A0A0G2JLL6 359 aaPredicted RBP13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 GRM1Q13255 1194 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 UBE2SQ16763 222 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 PRRT2Q7Z6L0 340 aaPredicted RBP13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 TMEM260Q9NX78 707 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 OPLAHO14841 1288 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 CTAGE5O15320 804 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 NAPAP54920 295 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 LPAR1Q92633 364 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 RAVER2Q9HCJ3 691 aaKnown RBP13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
CHRNB3-201ENST00000289957 PPIL2Q13356 520 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 FAM13BQ9NYF5 915 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 CFAP45Q9UL16 551 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 KCNH4Q9UQ05 1017 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 PCDHA1Q9Y5I3 950 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 CYP2C8P10632 490 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 USP14P54578 494 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 NLRP5P59047 1200 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 PTPN18Q99952 460 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
CHRNB3-201ENST00000289957 LOC285556D6RIA3 1793 aa13.08□□□□□ -0.31
CHRNB3-201ENST00000289957 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ATP2B1P20020 1258 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 RBM10P98175 930 aaKnown RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 DNTTIP2Q5QJE6 756 aaKnown RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 BRI3BPQ8WY22 251 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 PPP1R9AQ9ULJ8 1098 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 C19orf81C9J6K1 198 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 VWA5AO00534 786 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 TOMM70O94826 608 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF75DP51815 510 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 TRIM29Q14134 588 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 TNFRSF25Q93038 417 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 PURBQ96QR8 312 aaKnown RBP13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 PYCARDQ9ULZ3 195 aa13.08□□□□□ -0.32
CHRNB3-201ENST00000289957 SMARCA1P28370 1054 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 RASAL3Q86YV0 1011 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 WASF1Q92558 559 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
CHRNB3-201ENST00000289957 M0R2N6 131 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms