RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 FBXO11Q86XK2 927 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 KIFC2Q96AC6 838 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 TIGD1Q96MW7 591 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 WRNIP1Q96S55 665 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 ADARB2Q9NS39 739 aaKnown RBP20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 KIAA1468Q9P260 1216 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L15C9J2P7 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L13C9JLJ4 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L11C9JVI0 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L18D6R9N7 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L22D6RA61 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L17D6RBQ6 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L19D6RCP7 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L20D6RJB6 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 POLR2DO15514 142 aaKnown RBP20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 MRPL12P52815 198 aaKnown RBP20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L24Q0WX57 530 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 PRKG1Q13976 671 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 GPR162Q16538 588 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 HS1BP3Q53T59 392 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 USP17L6PQ6QN14 398 aa20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 SYMPKQ92797 1274 aaKnown RBP20.39■□□□□ 0.86
KLHDC3-201ENST00000244670 FBXO28Q9NVF7 368 aa20.39■□□□□ 0.85
KLHDC3-201ENST00000244670 SSC5DA1L4H1 1573 aa20.39■□□□□ 0.85
KLHDC3-201ENST00000244670 CLK2P49760 499 aaKnown RBP20.38■□□□□ 0.85
KLHDC3-201ENST00000244670 CCDC174Q6PII3 467 aa20.38■□□□□ 0.85
KLHDC3-201ENST00000244670 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
KLHDC3-201ENST00000244670 CNNM3Q8NE01 707 aa20.38■□□□□ 0.85
KLHDC3-201ENST00000244670 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
KLHDC3-201ENST00000244670 IQCB1Q15051 598 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 ZSCAN30Q86W11 494 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 SCYL3Q8IZE3 742 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 HOOK2Q96ED9 719 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 SERTAD1Q9UHV2 236 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 A0A087X0B3 334 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 CAVIN2O95810 425 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 PLCB2Q00722 1185 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 MTMR2Q13614 643 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 ARL6IP4Q66PJ3 421 aaKnown RBP20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 CHURC1Q8WUH1 139 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 ANO10Q9NW15 660 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 ZNF112Q9UJU3 913 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 PPP2R3BQ9Y5P8 575 aa20.37■□□□□ 0.85
KLHDC3-201ENST00000244670 FOXN1O15353 648 aa20.36■□□□□ 0.85
KLHDC3-201ENST00000244670 PNOCQ13519 176 aa20.36■□□□□ 0.85
KLHDC3-201ENST00000244670 GINM1Q9NU53 330 aa20.36■□□□□ 0.85
KLHDC3-201ENST00000244670 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
KLHDC3-201ENST00000244670 ADM5C9JUS6 153 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 NEMFO60524 1076 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 TDP2O95551 362 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 POTEDQ86YR6 584 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 DHX58Q96C10 678 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 KIAA1683Q9H0B3 1180 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 FEM1BQ9UK73 627 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 PITPNM2Q9BZ72 1349 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 BIN1O00499 593 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 EDIL3O43854 480 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 CDC25AP30304 524 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 SPP2Q13103 211 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 DPY19L2Q6NUT2 758 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 DTHD1Q6ZMT9 781 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 FAM160B2Q86V87 743 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 DCPSQ96C86 337 aaKnown RBP20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 RANBP17Q9H2T7 1088 aaKnown RBP20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 PICK1Q9NRD5 415 aa20.35■□□□□ 0.85
KLHDC3-201ENST00000244670 MEIS2O14770 477 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 OR52Z1P0C646 297 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 MSNP26038 577 aaKnown RBP20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 DPCR1Q3MIW9 517 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 GRAMD1CQ8IYS0 662 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 GLT8D2Q9H1C3 349 aa20.34■□□□□ 0.85
KLHDC3-201ENST00000244670 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 ACTN4O43707 911 aaKnown RBP20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 SLC37A4O43826 429 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 PTPRAP18433 802 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 LONP1P36776 959 aaKnown RBP20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 SUPT20HL1Q3ZLR7 823 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 DHX40Q8IX18 779 aaKnown RBP20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 TANGO6Q9C0B7 1094 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 TUBE1Q9UJT0 475 aa20.33■□□□□ 0.85
KLHDC3-201ENST00000244670 PP2D1A8MPX8 630 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 LAD1O00515 517 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 OPLAHO14841 1288 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 PLA2G6O60733 806 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 ISM2Q6H9L7 571 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 SULF1Q8IWU6 871 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 LPAR1Q92633 364 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 P2RX7Q99572 595 aaKnown RBP20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 ANO3Q9BYT9 981 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 EMILIN3Q9NT22 766 aa20.33■□□□□ 0.84
KLHDC3-201ENST00000244670 PHIPQ8WWQ0 1821 aa20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 PRR29P0C7W0 189 aa20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 VCAM1P19320 739 aa20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 HOXA13P31271 388 aaPredicted RBP20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 ZRSR1Q15695 479 aaKnown RBP20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 CEP57L1Q8IYX8 460 aa20.32■□□□□ 0.84
KLHDC3-201ENST00000244670 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms