RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Jakmip3Q5DTN8 844 aa25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Prpf4bQ61136 1007 aaKnown RBP25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Lrrd1Q8C0R9 853 aa25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Hmgn5Q9JL35 406 aa25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Btn2a2A4QPC6 514 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Mms22lB1AUR6 1238 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Tyro3P55144 880 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Ift122Q6NWV3 1182 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 AdpgkQ8VDL4 496 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Scn3aA2ASI5 1947 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Slc39a2G3X943 309 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Nedd1P33215 660 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Meis2P97367 477 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Trim29Q8R2Q0 587 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Nr3c2Q8VII8 978 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 TnmdQ9EP64 317 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Sh3bgrQ9WUZ7 214 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Mtmr9Q9Z2D0 545 aa25.92■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Brpf3B2KF05 1204 aaKnown RBP25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Arhgef25Q9CWR0 618 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Ccdc94Q9D6J3 314 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Mctp1E9PV86 951 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Flot1O08917 428 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 AoahO35298 574 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Dync1li2Q6PDL0 492 aaKnown RBP25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Cdca8Q8BHX3 289 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Ces1Q8VCC2 565 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Bhmt2Q91WS4 363 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 PdgfdQ925I7 370 aa25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Mrpl11Q9CQF0 192 aaKnown RBP25.91■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Ulk4Q3V129 1303 aa25.9■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Hoxa13Q62424 386 aa25.9■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Fbxo10Q7TQF2 950 aa25.9■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Zfp202Q8C879 641 aa25.9■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Usp14Q9JMA1 493 aaKnown RBP25.9■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Dock2Q8C3J5 1828 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Kcna3P16390 528 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Nr5a1P33242 462 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Senp5Q6NXL6 749 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Sap130Q8BIH0 1057 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Hs2st1Q8R3H7 356 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Dusp10Q9ESS0 483 aa25.89■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Dapk3O54784 448 aa25.89■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Hoxa11P31311 313 aa25.89■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Lca5lQ8C0X0 741 aa25.89■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ppp2r5dQ91V89 594 aa25.89■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Atp5c1Q91VR2 298 aaKnown RBP25.89■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rad51bO35719 350 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 CatspereP0DP43 985 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Churc1Q6DG52 112 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Pgrmc2Q80UU9 217 aaKnown RBP25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ccdc172Q810N9 267 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ctdspl2Q8BG15 465 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Calml3Q9D6P8 149 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Tulp1Q9Z273 543 aa25.88■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Skint3A7TZF0 458 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Gm44503E9PYU5 387 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Gm21969J3QJZ1 289 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Traf1P39428 409 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ddx49Q4FZF3 480 aaKnown RBP25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Cnnm4Q69ZF7 771 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Hook1Q8BIL5 728 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Dnaaf4Q8R368 420 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Cmtm5Q9D6G9 156 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 S1pr4Q9Z0L1 386 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Gm5134E9QAB5 671 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Hmx1O70218 332 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ccdc150Q8CDI7 1110 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Dcaf8Q8N7N5 591 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Kcnh3Q9WVJ0 1095 aa25.87■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ppp1r9aH3BJD6 1292 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Polr3gQ6NXY9 223 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Ireb2Q811J3 963 aaKnown RBP25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rec8Q8C5S7 591 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Zscan29E9Q5B4 869 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 RdxP26043 583 aaKnown RBP25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Kifap3P70188 793 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Gas2l3Q3UWW6 683 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Olfr119Q7TRJ5 321 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Sulf1Q8K007 870 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 HlcsQ920N2 722 aa25.86■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Gm15448F6PZL4 682 aa25.85■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Epb41l2O70318 988 aaKnown RBP25.85■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rgl1Q60695 768 aa25.85■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rasa3Q60790 834 aa25.85■■□□□ 1.73
Upf3a-201ENSMUST00000043767 C87977A2A958 498 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Otud5Q3U2S4 566 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Pex1Q5BL07 1284 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Yars2Q8BYL4 472 aaKnown RBP25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rbm42Q91V81 474 aaKnown RBP25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Rrp1P56183 494 aaKnown RBP25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Kiaa1468Q148V7 1216 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Arl14Q3SXC5 192 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Pla2g4eQ50L42 875 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Dusp9Q7TNL7 452 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Siglec10Q80ZE3 688 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Vmn1r199Q8R280 367 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Mmtag2Q99LX5 260 aaKnown RBP25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Cd274Q9EP73 290 aa25.84■■□□□ 1.73
Upf3a-201ENSMUST00000043767 Slc4a9E9PUP3 929 aa25.83■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms