RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 GNAQP50148 359 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 ST5P78524 1137 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 KCNB1Q14721 858 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 OR8K1Q8NGG5 319 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 TGFBRAP1Q8WUH2 860 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 LUC7L2Q9Y383 392 aaKnown RBP12.65□□□□□ -0.38
VARS2-213ENST00000625423 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 GRIK5Q16478 980 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
VARS2-213ENST00000625423 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 ZNF444Q8N0Y2 327 aaPredicted RBP12.65□□□□□ -0.38
VARS2-213ENST00000625423 MSANTD4Q8NCY6 345 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 NARFQ9UHQ1 456 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 RAB21Q9UL25 225 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 LAMB1P07942 1786 aa12.65□□□□□ -0.39
VARS2-213ENST00000625423 CTAGE15A4D2H0 777 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 MAP2K7O14733 419 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 RHOBTB3O94955 611 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 TM4SF1P30408 202 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 STIM1Q13586 685 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 ZNF507Q8TCN5 953 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 CCSER1Q9C0I3 900 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 MYH8P13535 1937 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 H3BQF6 201 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 PSMA7O14818 248 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 EEF1GP26641 437 aaKnown RBP12.64□□□□□ -0.39
VARS2-213ENST00000625423 GYS2P54840 703 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 MCM6Q14566 821 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 WHAMMP3Q1A5X7 153 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 GIMAP8Q8ND71 665 aaPredicted RBP12.64□□□□□ -0.39
VARS2-213ENST00000625423 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
VARS2-213ENST00000625423 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 SAP30BPQ9UHR5 308 aaKnown RBP12.64□□□□□ -0.39
VARS2-213ENST00000625423 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 NCAPH2Q6IBW4 605 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 TTI2Q6NXR4 508 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 DNAJC7Q99615 494 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
VARS2-213ENST00000625423 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 IRS2Q9Y4H2 1338 aa12.64□□□□□ -0.39
VARS2-213ENST00000625423 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 B4DLN1 442 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 ZPR1O75312 459 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 AMPD2Q01433 879 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 USP21Q9UK80 565 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 CAPN11Q9UMQ6 739 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 COL5A3P25940 1745 aaPredicted RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 PALM3A6NDB9 673 aaPredicted RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 PLCG1P19174 1290 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 VSNL1P62760 191 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 GALNT17Q6IS24 598 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 CABP7Q86V35 215 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 NOA1Q8NC60 698 aaKnown RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 CASZ1Q86V15 1759 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 ENC1O14682 589 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 MYL1P05976 194 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
VARS2-213ENST00000625423 GPR101Q96P66 508 aaPredicted RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
VARS2-213ENST00000625423 LAD1O00515 517 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 GNPATO15228 680 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
VARS2-213ENST00000625423 ERLIN1O75477 346 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 RASA1P20936 1047 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 NAPAP54920 295 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
VARS2-213ENST00000625423 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 TUBGCP2Q9BSJ2 902 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
VARS2-213ENST00000625423 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms