RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 PIWIL2Q8TC59 973 aaKnown RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 ZNF669Q96BR6 464 aaPredicted RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 MRGPRX3Q96LB0 322 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 HDAC8Q9BY41 377 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 GPR62Q9BZJ7 368 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 EPN3Q9H201 632 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 MKNK2Q9HBH9 465 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 SEMA3GQ9NS98 782 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 PIM2Q9P1W9 311 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 WHRNQ9P202 907 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 ZC3H7BQ9UGR2 993 aaKnown RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 LEMD3Q9Y2U8 911 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 CD109Q6YHK3 1445 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 SUPT6HQ7KZ85 1726 aaKnown RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 MAPKBP1O60336 1514 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ARHGAP5Q13017 1502 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 MAGI3Q5TCQ9 1506 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 CYP26A1O43174 497 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 SIGLEC6O43699 453 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ITGAVP06756 1048 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 FAM153BP0C7A2 387 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ITGA4P13612 1032 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 FOSL1P15407 271 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 SSRP1Q08945 709 aaKnown RBP5.69□□□□□ -1.5
ATRX-209ENST00000623242 SQSTM1Q13501 440 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 SV2CQ496J9 727 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ARTNQ5T4W7 220 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 CDKAL1Q5VV42 579 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ADAT2Q7Z6V5 191 aaKnown RBP5.69□□□□□ -1.5
ATRX-209ENST00000623242 ZNF227Q86WZ6 799 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ARHGEF39Q8N4T4 335 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 SYTL5Q8TDW5 730 aaPredicted RBP5.69□□□□□ -1.5
ATRX-209ENST00000623242 HSPA12BQ96MM6 686 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 SPATA9Q9BWV2 254 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 ARHGEF4Q9NR80 690 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 PRR13Q9NZ81 148 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 CGGBP1Q9UFW8 167 aaPredicted RBP5.69□□□□□ -1.5
ATRX-209ENST00000623242 FHOD1Q9Y613 1164 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 KDM2BQ8NHM5 1336 aa5.69□□□□□ -1.5
ATRX-209ENST00000623242 A0A087WZG4 1122 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 FAM155AB1AL88 458 aaPredicted RBP5.68□□□□□ -1.5
ATRX-209ENST00000623242 H0Y8X5 98 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 H3BS24 57 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 MEIS1O00470 390 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 FOXB2Q5VYV0 432 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 FIBCD1Q8N539 461 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 LRRN4CLQ8ND94 238 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 NETO1Q8TDF5 533 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 SH3TC2Q8TF17 1288 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 RCC1LQ96I51 464 aaKnown RBP5.68□□□□□ -1.5
ATRX-209ENST00000623242 GBP3Q9H0R5 595 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 NOL6Q9H6R4 1146 aaKnown RBP5.68□□□□□ -1.5
ATRX-209ENST00000623242 CHST7Q9NS84 486 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 EMC9Q9Y3B6 208 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 ABCC10Q5T3U5 1492 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 LRRIQ1Q96JM4 1722 aa5.68□□□□□ -1.5
ATRX-209ENST00000623242 PHLDB1Q86UU1 1377 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 MYOM3Q5VTT5 1437 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 PPM1BO75688 479 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 NAT2P11245 290 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 GRIA2P42262 883 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 CYP4F3Q08477 520 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 LRP8Q14114 963 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 PPP2R5DQ14738 602 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 MSMPQ1L6U9 139 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 GAB4Q2WGN9 574 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 C2orf27AQ580R0 203 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 NOL9Q5SY16 702 aaKnown RBP5.67□□□□□ -1.5
ATRX-209ENST00000623242 YOD1Q5VVQ6 348 aaPredicted RBP5.67□□□□□ -1.5
ATRX-209ENST00000623242 SDE2Q6IQ49 451 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 ARHGAP27Q6ZUM4 889 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
ATRX-209ENST00000623242 TRIM59Q8IWR1 403 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 BVESQ8NE79 360 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 SGSM3Q96HU1 749 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 MCMBPQ9BTE3 642 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 AKT3Q9Y243 479 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
ATRX-209ENST00000623242 SUGT1Q9Y2Z0 365 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATRX-209ENST00000623242 PITPNM2Q9BZ72 1349 aa5.67□□□□□ -1.5
ATRX-209ENST00000623242 ESYT3A0FGR9 886 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 MED26O95402 600 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 TSPY4P0CV99 314 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 TSPY10P0CW01 314 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 CLCN7P51798 805 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 HNRNPMP52272 730 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATRX-209ENST00000623242 PPP2R2AP63151 447 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 IFI16Q16666 785 aaKnown RBP5.66□□□□□ -1.5
ATRX-209ENST00000623242 CRTC3Q6UUV7 619 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 ZBTB38Q8NAP3 1195 aaPredicted RBP5.66□□□□□ -1.5
ATRX-209ENST00000623242 DAGLBQ8NCG7 672 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 ENOX1Q8TC92 643 aaKnown RBP5.66□□□□□ -1.5
ATRX-209ENST00000623242 THAP3Q8WTV1 239 aaPredicted RBP5.66□□□□□ -1.5
ATRX-209ENST00000623242 BTN2A2Q8WVV5 523 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 PPP1R14AQ96A00 147 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 TCTN2Q96GX1 697 aa5.66□□□□□ -1.5
ATRX-209ENST00000623242 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms