RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
USHBP1-210ENST00000600286 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
USHBP1-210ENST00000600286 CDKL5O76039 1030 aa19.36■□□□□ 0.69
USHBP1-210ENST00000600286 BCRP11274 1271 aa19.36■□□□□ 0.69
USHBP1-210ENST00000600286 CCT2P78371 535 aaKnown RBP19.36■□□□□ 0.69
USHBP1-210ENST00000600286 CCDC174Q6PII3 467 aa19.36■□□□□ 0.69
USHBP1-210ENST00000600286 TMTC3Q6ZXV5 915 aa19.36■□□□□ 0.69
USHBP1-210ENST00000600286 SPATC1LQ9H0A9 340 aa19.36■□□□□ 0.69
USHBP1-210ENST00000600286 RANBP17Q9H2T7 1088 aaKnown RBP19.36■□□□□ 0.69
USHBP1-210ENST00000600286 RBM27Q9P2N5 1060 aaKnown RBP19.36■□□□□ 0.69
USHBP1-210ENST00000600286 ADGRA2Q96PE1 1338 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 MAPK4P31152 587 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 TMEM132BQ14DG7 1078 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 TKFCQ3LXA3 575 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 WDR78Q5VTH9 848 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 SNRNP48Q6IEG0 339 aaKnown RBP19.35■□□□□ 0.69
USHBP1-210ENST00000600286 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 MROH8Q9H579 483 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 JMJD4Q9H9V9 463 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
USHBP1-210ENST00000600286 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-210ENST00000600286 BTBD7Q9P203 1132 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 TPCN1Q9ULQ1 816 aa19.35■□□□□ 0.69
USHBP1-210ENST00000600286 MKI67P46013 3256 aaKnown RBP19.34■□□□□ 0.69
USHBP1-210ENST00000600286 ZBTB5O15062 677 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 PFKFB2O60825 505 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 FMNL1O95466 1100 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-210ENST00000600286 ICAM1P05362 532 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 HOXD10P28358 340 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 ADD1P35611 737 aaKnown RBP19.34■□□□□ 0.69
USHBP1-210ENST00000600286 FCGRTP55899 365 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 CDC37Q16543 378 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-210ENST00000600286 NCAPG2Q86XI2 1143 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 FBXO11Q86XK2 927 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 HOMER1Q86YM7 354 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 SRBD1Q8N5C6 995 aaKnown RBP19.34■□□□□ 0.69
USHBP1-210ENST00000600286 SHCBP1Q8NEM2 672 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 CPVLQ9H3G5 476 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 TXNRD2Q9NNW7 524 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 FBXO40Q9UH90 709 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 HPS5Q9UPZ3 1129 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 IVNS1ABPQ9Y6Y0 642 aa19.34■□□□□ 0.69
USHBP1-210ENST00000600286 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 PLEKHA8P1O95397 391 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 Q3C1V9 767 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 RIOX2Q8IUF8 465 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 COA7Q96BR5 231 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 AMNQ9BXJ7 453 aa19.33■□□□□ 0.68
USHBP1-210ENST00000600286 CNMDO75829 334 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 ALAS1P13196 640 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 CDC27P30260 824 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 SNAP25P60880 206 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 LACTBP83111 547 aaPredicted RBP19.32■□□□□ 0.68
USHBP1-210ENST00000600286 SSRP1Q08945 709 aaKnown RBP19.32■□□□□ 0.68
USHBP1-210ENST00000600286 QRICH1Q2TAL8 776 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
USHBP1-210ENST00000600286 CHST13Q8NET6 341 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 REPS2Q8NFH8 660 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 PIBF1Q8WXW3 757 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 PIGSQ96S52 555 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 MOV10L1Q9BXT6 1211 aaKnown RBP19.32■□□□□ 0.68
USHBP1-210ENST00000600286 ZNF214Q9UL59 606 aaPredicted RBP19.32■□□□□ 0.68
USHBP1-210ENST00000600286 NID2Q14112 1375 aa19.32■□□□□ 0.68
USHBP1-210ENST00000600286 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 STRNO43815 780 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 GNRH1P01148 92 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 IFNAR1P17181 557 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 PSMC4P43686 418 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 PKN2Q16513 984 aaKnown RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 ME3Q16798 604 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 PLEKHH3Q7Z736 793 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 AGBL1Q96MI9 1066 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 TRERF1Q96PN7 1200 aa19.31■□□□□ 0.68
USHBP1-210ENST00000600286 NCOA5Q9HCD5 579 aaKnown RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 FAM217BQ9NTX9 383 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 MRPL11Q9Y3B7 192 aaKnown RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 V9GY48 417 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-210ENST00000600286 ABCB11O95342 1321 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 ERCC3P19447 782 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 SCRN1Q12765 414 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 MTMR8Q96EF0 704 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 SLC5A4Q9NY91 659 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 PCDHA1Q9Y5I3 950 aa19.3■□□□□ 0.68
USHBP1-210ENST00000600286 RBBP6Q7Z6E9 1792 aaKnown RBP19.29■□□□□ 0.68
USHBP1-210ENST00000600286 PRPF3O43395 683 aaKnown RBP19.29■□□□□ 0.68
USHBP1-210ENST00000600286 CYTH3O43739 400 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 FCER1AP12319 257 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 CAP1Q01518 475 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 MLLT1Q03111 559 aaPredicted RBP19.29■□□□□ 0.68
USHBP1-210ENST00000600286 KCTD2Q14681 263 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 USH1GQ495M9 461 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 CD99L2Q8TCZ2 262 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 GTF3C6Q969F1 213 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 SLC26A6Q9BXS9 759 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms