RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	CFAP99	D6REC4	459 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	IGHA2	P01877	340 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	GNAI3	P08754	354 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	MCM4	P33991	863 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	CAP2	P40123	477 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	PABPC4	Q13310	644 aa	Known RBP eCLIP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	L1TD1	Q5T7N2	865 aa	Known RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	WDR78	Q5VTH9	848 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	MFSD14C	Q5VZR4	134 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	CASC1	Q6TDU7	716 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	LYPD8	Q6UX82	237 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	C16orf59	Q7L2K0	433 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	ZNF598	Q86UK7	904 aa	Known RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	ZNF384	Q8TF68	577 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	EDC3	Q96F86	508 aa	Known RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	SLK	Q9H2G2	1235 aa	Predicted RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	C9orf78	Q9NZ63	289 aa	Predicted RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	CXXC1	Q9P0U4	656 aa	Predicted RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	ZNFX1	Q9P2E3	1918 aa	Known RBP	8.85	□□□□□ -0.99
NF1-222	ENST00000582892	WDR87	Q6ZQQ6	2873 aa		8.85	□□□□□ -0.99
NF1-222	ENST00000582892	ZNF318	Q5VUA4	2279 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	USP17L5	A8MUK1	530 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	KBTBD13	C9JR72	458 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	EPB41L2	O43491	1005 aa	Known RBP	8.84	□□□□□ -0.99
NF1-222	ENST00000582892	PQBP1	O60828	265 aa	Known RBP	8.84	□□□□□ -0.99
NF1-222	ENST00000582892	CLTB	P09497	229 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	RAG1	P15918	1043 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	HOXA7	P31268	230 aa	Predicted RBP	8.84	□□□□□ -0.99
NF1-222	ENST00000582892	BTD	P43251	543 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	PHKA1	P46020	1223 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	BACE1	P56817	501 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	RHBDL3	P58872	404 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	FPGS	Q05932	587 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	LAPTM4A	Q15012	233 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	RABEP1	Q15276	862 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	LRRC41	Q15345	812 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	PUM3	Q15397	648 aa	Known RBP	8.84	□□□□□ -0.99
NF1-222	ENST00000582892	FAM47A	Q5JRC9	791 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	PRAMEF19	Q5SWL8	479 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	LIAT1	Q6ZQX7	453 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	CCDC129	Q6ZRS4	1044 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	CLEC17A	Q6ZS10	378 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	KIF2C	Q99661	725 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	NKX2-4	Q9H2Z4	354 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	C1orf115	Q9H7X2	142 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	CD320	Q9NPF0	282 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	EVA1B	Q9NVM1	165 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	YBX2	Q9Y2T7	364 aa	Known RBP	8.84	□□□□□ -0.99
NF1-222	ENST00000582892	ZNF236	Q9UL36	1845 aa		8.84	□□□□□ -0.99
NF1-222	ENST00000582892	FOCAD	Q5VW36	1801 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	KIAA0355	O15063	1070 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	GDF11	O95390	407 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	IFIT1	P09914	478 aa	Known RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	ATP2B2	Q01814	1243 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	KCNH2	Q12809	1159 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	TMEM259	Q4ZIN3	620 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	PLA2G2C	Q5R387	149 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	KRT40	Q6A162	431 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	CCAR1	Q8IX12	1150 aa	Known RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	LENG1	Q96BZ8	264 aa	Predicted RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	IRX2	Q9BZI1	471 aa	Predicted RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	OSBPL5	Q9H0X9	879 aa	Predicted RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	DNAJC18	Q9H819	358 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	CWC22	Q9HCG8	908 aa	Known RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892	BTBD7	Q9P203	1132 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	MYO5A	Q9Y4I1	1855 aa	Known RBP	8.83	□□□□□ -1
NF1-222	ENST00000582892		A0A0G2JMZ2	1700 aa		8.83	□□□□□ -1
NF1-222	ENST00000582892	DCHS1	Q96JQ0	3298 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892		K7ELQ4	463 aa	Predicted RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	RFXAP	O00287	272 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	GNAI2	P04899	355 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ACR	P10323	421 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	GSPT1	P15170	499 aa	Known RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	ADORA1	P30542	326 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	CTH	P32929	405 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ZYX	Q15942	572 aa	Known RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	SKOR2	Q2VWA4	1001 aa	Predicted RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	RABL6	Q3YEC7	729 aa	Predicted RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	TMEM240	Q5SV17	173 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	SLC4A10	Q6U841	1118 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ARRDC4	Q8NCT1	418 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ARMC2	Q8NEN0	867 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ANKS1A	Q92625	1134 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	TACC3	Q9Y6A5	838 aa		8.82	□□□□□ -1
NF1-222	ENST00000582892	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	8.82	□□□□□ -1
NF1-222	ENST00000582892	MROH7-TTC4	A0A0A0MT08	1334 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	SALL1	Q9NSC2	1324 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	SLC15A5	A6NIM6	579 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	MSC	O60682	206 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	GPR37L1	O60883	481 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	REC8	O95072	547 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	PGK1	P00558	417 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	HOXC6	P09630	235 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	SLC5A1	P13866	664 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	MYOG	P15173	224 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	FAAP100	Q0VG06	881 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	GRB14	Q14449	540 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	RAB3GAP1	Q15042	981 aa		8.81	□□□□□ -1
NF1-222	ENST00000582892	RASIP1	Q5U651	963 aa		8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms