RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF713Q8N859 430 aaPredicted RBP16.52■□□□□ 0.24
SKA2-205ENST00000580541 FAM184AQ8NB25 1140 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 AMNQ9BXJ7 453 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
SKA2-205ENST00000580541 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 BAZ2BQ9UIF8 2168 aaKnown RBP16.52■□□□□ 0.24
SKA2-205ENST00000580541 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 TKFCQ3LXA3 575 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 CCAR1Q8IX12 1150 aaKnown RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 FAM177A1Q8N128 213 aaPredicted RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 ATG4CQ96DT6 458 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 MTMR8Q96EF0 704 aa16.51■□□□□ 0.23
SKA2-205ENST00000580541 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
SKA2-205ENST00000580541 STK36Q9NRP7 1315 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 CYTH3O43739 400 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 TLR2O60603 784 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 SLC25A27O95847 323 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 ICAM1P05362 532 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 CYP2C8P10632 490 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 STAT3P40763 770 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 FUT2Q10981 343 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 PLS1Q14651 629 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
SKA2-205ENST00000580541 PHKBQ93100 1093 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 PIGSQ96S52 555 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 ZIC5Q96T25 663 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 TEX13BQ9BXU2 312 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 MAF1Q9H063 256 aa16.5■□□□□ 0.23
SKA2-205ENST00000580541 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 SCG2P13521 617 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
SKA2-205ENST00000580541 TRIM29Q14134 588 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
SKA2-205ENST00000580541 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 PAGR1Q9BTK6 254 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 CFHR5Q9BXR6 569 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 GLT8D2Q9H1C3 349 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 SAGE1Q9NXZ1 904 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
SKA2-205ENST00000580541 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
SKA2-205ENST00000580541 PDCP20941 246 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 SAMD3Q8N6K7 520 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 SPATC1LQ9H0A9 340 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 CWC22Q9HCG8 908 aaKnown RBP16.48■□□□□ 0.23
SKA2-205ENST00000580541 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 MORF4L1Q9UBU8 362 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 MYH6P13533 1939 aa16.48■□□□□ 0.23
SKA2-205ENST00000580541 ABCB11O95342 1321 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 CTDNEP1O95476 244 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 ERVK-24P63145 666 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 CRHR2Q13324 411 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 MCF2L2Q86YR7 1114 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 CHST13Q8NET6 341 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 MROH8Q9H579 483 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
SKA2-205ENST00000580541 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
SKA2-205ENST00000580541 TRPA1O75762 1119 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 GNA11P29992 359 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 KIF22Q14807 665 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
SKA2-205ENST00000580541 GALNT17Q6IS24 598 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
SKA2-205ENST00000580541 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms