RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 APEX2Q9UBZ4 518 aa7.63□□□□□ -1.19
CDC27-216ENST00000574304 CGGBP1Q9UFW8 167 aaPredicted RBP7.63□□□□□ -1.19
CDC27-216ENST00000574304 GPR55Q9Y2T6 319 aaPredicted RBP7.63□□□□□ -1.19
CDC27-216ENST00000574304 R3HCC1Q9Y3T6 440 aaKnown RBP7.63□□□□□ -1.19
CDC27-216ENST00000574304 LRRC10BA6NIK2 292 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 NOTOA8MTQ0 251 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 FADS2P1A8MWK0 482 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 NRDCO43847 1150 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 PSPNO60542 156 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 DDAH1O94760 285 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 SNX17Q15036 470 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 MLANAQ16655 118 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 ANKS3Q6ZW76 656 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 ARHGEF39Q8N4T4 335 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 ZNF513Q8N8E2 541 aaPredicted RBP7.62□□□□□ -1.19
CDC27-216ENST00000574304 NAT16Q8N8M0 369 aa7.62□□□□□ -1.19
CDC27-216ENST00000574304 HNRNPLLQ8WVV9 542 aaKnown RBP7.62□□□□□ -1.19
CDC27-216ENST00000574304 CWC22Q9HCG8 908 aaKnown RBP7.62□□□□□ -1.19
CDC27-216ENST00000574304 VAMP4O75379 141 aa7.61□□□□□ -1.19
CDC27-216ENST00000574304 IFNGR1P15260 489 aa7.61□□□□□ -1.19
CDC27-216ENST00000574304 RTP1P59025 263 aa7.61□□□□□ -1.19
CDC27-216ENST00000574304 MICAL1Q8TDZ2 1067 aa7.61□□□□□ -1.19
CDC27-216ENST00000574304 AKT3Q9Y243 479 aa7.61□□□□□ -1.19
CDC27-216ENST00000574304 FGF10O15520 208 aaPredicted RBP7.6□□□□□ -1.19
CDC27-216ENST00000574304 CEBPAP49715 358 aaPredicted RBP7.6□□□□□ -1.19
CDC27-216ENST00000574304 GRB10Q13322 594 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 PRR23BQ6ZRT6 265 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 NLRX1Q86UT6 975 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 TMEM52Q8NDY8 209 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 BVESQ8NE79 360 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 SHISA4Q96DD7 197 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 MCMBPQ9BTE3 642 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 TANGO6Q9C0B7 1094 aa7.6□□□□□ -1.19
CDC27-216ENST00000574304 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
CDC27-216ENST00000574304 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
CDC27-216ENST00000574304 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 WTIPA6NIX2 430 aaPredicted RBP7.59□□□□□ -1.19
CDC27-216ENST00000574304 AURKAO14965 403 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 GJB6O95452 261 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 EFEMP2O95967 443 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 GALK1P51570 392 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 AMPD2Q01433 879 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 HSF5Q4G112 596 aaPredicted RBP7.59□□□□□ -1.19
CDC27-216ENST00000574304 MRM1Q6IN84 353 aaKnown RBP7.59□□□□□ -1.19
CDC27-216ENST00000574304 GALNT18Q6P9A2 607 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 CYP2R1Q6VVX0 501 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 SLCO6A1Q86UG4 719 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 CRACR2BQ8N4Y2 399 aaPredicted RBP7.59□□□□□ -1.19
CDC27-216ENST00000574304 POU5F2Q8N7G0 328 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 CELF2-AS1Q8N7Q2 184 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 PLCD4Q9BRC7 762 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 SLC6A17Q9H1V8 727 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 EMC9Q9Y3B6 208 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 TAF6LQ9Y6J9 622 aa7.59□□□□□ -1.19
CDC27-216ENST00000574304 STXBP3O00186 592 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 NOP56O00567 594 aaKnown RBP7.58□□□□□ -1.2
CDC27-216ENST00000574304 KLF4O43474 513 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 SUSD5O60279 629 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 STK10O94804 968 aaKnown RBP7.58□□□□□ -1.2
CDC27-216ENST00000574304 HLA-DQA1Q5Y7H0 255 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 RCSD1Q6JBY9 416 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 POMZP3Q6PJE2 187 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 SIRT2Q8IXJ6 389 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 INTS4Q96HW7 963 aaKnown RBP7.58□□□□□ -1.2
CDC27-216ENST00000574304 PTCHD1Q96NR3 888 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 DIRC2Q96SL1 478 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 NSUN3Q9H649 340 aaKnown RBP7.58□□□□□ -1.2
CDC27-216ENST00000574304 ST7Q9NRC1 585 aa7.58□□□□□ -1.2
CDC27-216ENST00000574304 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
CDC27-216ENST00000574304 KCNH1O95259 989 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 DDR2Q16832 855 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 SV2CQ496J9 727 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 EEF1DP3Q658K8 133 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 IRF2BP1Q8IU81 584 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 EPB41L4BQ9H329 900 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 CRTAC1Q9NQ79 661 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 BACE2Q9Y5Z0 518 aa7.57□□□□□ -1.2
CDC27-216ENST00000574304 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 SEPHS1P49903 392 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 KIR3DS1Q14943 382 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 JAMLQ86YT9 394 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 LGR4Q9BXB1 951 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
CDC27-216ENST00000574304 TBC1D8O95759 1140 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 PNLIPP16233 465 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 PRKCAP17252 672 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 PDE6BP35913 854 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 MESP2Q0VG99 397 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 RAB33AQ14088 237 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 ZNF648Q5T619 568 aaPredicted RBP7.55□□□□□ -1.2
CDC27-216ENST00000574304 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 TRIM59Q8IWR1 403 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 CKAP2LQ8IYA6 745 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms