RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LETM2Q2VYF4 491 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 ZNF569Q5MCW4 686 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 LRRC10BA6NIK2 292 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 CCNT1O60563 726 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 BMS1Q14692 1282 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 TMCO3Q6UWJ1 677 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 UBA5Q9GZZ9 404 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 FLT1P17948 1338 aa11.31□□□□□ -0.6
LRRC28-216ENST00000559819 SMCO2A6NFE2 343 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 LDHCP07864 332 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 TPM1P09493 284 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 PLCG1P19174 1290 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 SPAG1Q07617 926 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 SLC35F6Q8N357 371 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 CEP95Q96GE4 821 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 PIGSQ96S52 555 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 CHP1Q99653 195 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 PUF60Q9UHX1 559 aaKnown RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 USP21Q9UK80 565 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 KIF5CO60282 957 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 KRT9P35527 623 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 GABPB1Q06547 395 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 JAKMIP3Q5VZ66 844 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 ZNF771Q7L3S4 317 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 CABP7Q86V35 215 aa11.3□□□□□ -0.6
LRRC28-216ENST00000559819 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-216ENST00000559819 FECHP22830 423 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 RHBDL3P58872 404 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 CLEC10AQ8IUN9 316 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 CCDC51Q96ER9 411 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 KBTBD4Q9NVX7 518 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 H7C1D1 291 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 SASH3O75995 380 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 OR52Z1P0C646 297 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TECP42680 631 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 CCSER1Q9C0I3 900 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TRIM10Q9UDY6 481 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 FCER1AP12319 257 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 KLK7P49862 253 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 PICALMQ13492 652 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 TMTC1Q8IUR5 882 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-216ENST00000559819 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 PARD6BQ9BYG5 372 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
LRRC28-216ENST00000559819 B4DLN1 442 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 ZBTB22O15209 634 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 TOM1O60784 492 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 KCNB1Q14721 858 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 TERF2Q15554 542 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 GALNT17Q6IS24 598 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 IL1R1P14778 569 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 PDE4DQ08499 809 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms