RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CDADC1Q9BWV3 514 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 AP5S1Q9NUS5 200 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS13C-207ENST00000558919 LRRC10BA6NIK2 292 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 NOTOA8MTQ0 251 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 FADS2P1A8MWK0 482 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 USP2O75604 605 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-207ENST00000558919 GSTM1P09488 218 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 GRB10Q13322 594 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 PPP2R5DQ14738 602 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 SLC14A2Q15849 920 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 FXNQ16595 210 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 TIGD5Q53EQ6 642 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 CEP128Q6ZU80 1094 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 ZNF513Q8N8E2 541 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-207ENST00000558919 ADCY4Q8NFM4 1077 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 SHISA4Q96DD7 197 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 ZDHHC15Q96MV8 337 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 FCRL3Q96P31 734 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-207ENST00000558919 RNF32Q9H0A6 362 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 SLC6A17Q9H1V8 727 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 GPR160Q9UJ42 338 aa5.93□□□□□ -1.46
VPS13C-207ENST00000558919 A0A1W2PQ45 241 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 A0A1W2PQY0 241 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 FGF10O15520 208 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 PSPNO60542 156 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 FARP2O94887 1054 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 RTP1P59025 263 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 MLANAQ16655 118 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 LARP1BQ659C4 914 aaKnown RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 C6orf15Q6UXA7 325 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 CYP2R1Q6VVX0 501 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 FAM178BQ8IXR5 827 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 CRTAC1Q9NQ79 661 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 CGGBP1Q9UFW8 167 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 YBX2Q9Y2T7 364 aaKnown RBP5.92□□□□□ -1.46
VPS13C-207ENST00000558919 SUGT1Q9Y2Z0 365 aa5.92□□□□□ -1.46
VPS13C-207ENST00000558919 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 CD3EP07766 207 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 HLA-DQA1Q5Y7H0 255 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 GALNT18Q6P9A2 607 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 POMZP3Q6PJE2 187 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 PRR23BQ6ZRT6 265 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 SLCO6A1Q86UG4 719 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 IRF2BP1Q8IU81 584 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 NAT16Q8N8M0 369 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 TMEM52Q8NDY8 209 aa5.91□□□□□ -1.46
VPS13C-207ENST00000558919 INTS4Q96HW7 963 aaKnown RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
VPS13C-207ENST00000558919 AURKAO14965 403 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 VAMP4O75379 141 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 DDAH1O94760 285 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 YBX3P16989 372 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS13C-207ENST00000558919 AMPD2Q01433 879 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 MESP2Q0VG99 397 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 HSF5Q4G112 596 aaPredicted RBP5.9□□□□□ -1.46
VPS13C-207ENST00000558919 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 ANKS3Q6ZW76 656 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 BVESQ8NE79 360 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 FAM84AQ96KN4 292 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 APEX2Q9UBZ4 518 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 AKT3Q9Y243 479 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 EMC9Q9Y3B6 208 aa5.9□□□□□ -1.46
VPS13C-207ENST00000558919 NOP56O00567 594 aaKnown RBP5.89□□□□□ -1.47
VPS13C-207ENST00000558919 TBC1D8O95759 1140 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 IFNGR1P15260 489 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 PNLIPP16233 465 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 EEF1DP3Q658K8 133 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-207ENST00000558919 HNRNPLLQ8WVV9 542 aaKnown RBP5.89□□□□□ -1.47
VPS13C-207ENST00000558919 PTCHD1Q96NR3 888 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 PLCD4Q9BRC7 762 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 MCMBPQ9BTE3 642 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 NSUN3Q9H649 340 aaKnown RBP5.89□□□□□ -1.47
VPS13C-207ENST00000558919 ACSL6Q9UKU0 697 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 TAF6LQ9Y6J9 622 aa5.89□□□□□ -1.47
VPS13C-207ENST00000558919 B2RBV5 119 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 KLF4O43474 513 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 SUSD5O60279 629 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 GJB6O95452 261 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 EFEMP2O95967 443 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 TRIM59Q8IWR1 403 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 FBXO15Q8NCQ5 510 aaPredicted RBP5.88□□□□□ -1.47
VPS13C-207ENST00000558919 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 JMJD8Q96S16 334 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 SLC38A3Q99624 504 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 EPN3Q9H201 632 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
VPS13C-207ENST00000558919 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
VPS13C-207ENST00000558919 C2orf71A6NGG8 1288 aa5.87□□□□□ -1.47
VPS13C-207ENST00000558919 STXBP3O00186 592 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms