RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SRGAP1Q7Z6B7 1085 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 RABGGTAQ92696 567 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 RHOXF2Q9BQY4 288 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 ANKZF1Q9H8Y5 726 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 RMND1Q9NWS8 449 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 BARHL2Q9NY43 387 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 CDC23Q9UJX2 597 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 GUCA1BQ9UMX6 200 aa19.93■□□□□ 0.78
XRCC3-218ENST00000557439 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
XRCC3-218ENST00000557439 CCNT1O60563 726 aaKnown RBP19.92■□□□□ 0.78
XRCC3-218ENST00000557439 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 SPTY2D1Q68D10 685 aaPredicted RBP19.92■□□□□ 0.78
XRCC3-218ENST00000557439 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 B4DLN1 442 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 ENC1O14682 589 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 FCER1AP12319 257 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 NAPAP54920 295 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 TMTC1Q8IUR5 882 aa19.92■□□□□ 0.78
XRCC3-218ENST00000557439 BTDP43251 543 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 CCDC178Q5BJE1 867 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 NCAPH2Q6IBW4 605 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 CYP26C1Q6V0L0 522 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 ANKRD20A12PQ8NF67 263 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 ARFGAP3Q9NP61 516 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
XRCC3-218ENST00000557439 SBF2Q86WG5 1849 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 CTAGE9A4FU28 777 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 PALM3A6NDB9 673 aaPredicted RBP19.91■□□□□ 0.78
XRCC3-218ENST00000557439 ERCC3P19447 782 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 FECHP22830 423 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 OAS2P29728 719 aaKnown RBP19.91■□□□□ 0.78
XRCC3-218ENST00000557439 TECP42680 631 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 SPAG1Q07617 926 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 CLEC10AQ8IUN9 316 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 FUT8Q9BYC5 575 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 SH3GLB2Q9NR46 395 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 TMEM260Q9NX78 707 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 HDAC6Q9UBN7 1215 aa19.91■□□□□ 0.78
XRCC3-218ENST00000557439 JAKMIP3Q5VZ66 844 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 WDR66Q8TBY9 1149 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 AGPAT5Q9NUQ2 364 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 BIN2Q9UBW5 565 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-218ENST00000557439 ST5P78524 1137 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 STK4Q13043 487 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 LONRF2Q1L5Z9 754 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 CCDC51Q96ER9 411 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 EYA3Q99504 573 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 RTFDC1Q9BY42 306 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-218ENST00000557439 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 KBTBD4Q9NVX7 518 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 TTF2Q9UNY4 1162 aaKnown RBP19.9■□□□□ 0.78
XRCC3-218ENST00000557439 FLT1P17948 1338 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 MAST2Q6P0Q8 1798 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 H7C1D1 291 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 CDK8P49336 464 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 WDR59Q6PJI9 974 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 CABP7Q86V35 215 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 NGLY1Q96IV0 654 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 PIGSQ96S52 555 aa19.9■□□□□ 0.78
XRCC3-218ENST00000557439 DUSP9Q99956 384 aaKnown RBP19.9■□□□□ 0.78
XRCC3-218ENST00000557439 EPN1Q9Y6I3 576 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-218ENST00000557439 FRMPD2Q68DX3 1309 aaPredicted RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 SMCO2A6NFE2 343 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 NDUFA10O95299 355 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 GPSM2P81274 684 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 TTI2Q6NXR4 508 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 NOA1Q8NC60 698 aaKnown RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 ANKS1AQ92625 1134 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 PYM1Q9BRP8 204 aaKnown RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 LGALS16A8MUM7 142 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 BAG3O95817 575 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 SMC1AQ14683 1233 aaKnown RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 CCDC148Q8NFR7 591 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 ZNF507Q8TCN5 953 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 UIMC1Q96RL1 719 aa19.89■□□□□ 0.77
XRCC3-218ENST00000557439 NAPGQ99747 312 aaPredicted RBP19.89■□□□□ 0.77
XRCC3-218ENST00000557439 SRGAP2O75044 1071 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 RFC4P35249 363 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 ASIC1P78348 528 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 PDE4DQ08499 809 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 GRAPQ13588 217 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 ANKRD40Q6AI12 368 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 AMOTL1Q8IY63 956 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 CSGALNACT2Q8N6G5 542 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 GIMAP8Q8ND71 665 aaPredicted RBP19.88■□□□□ 0.77
XRCC3-218ENST00000557439 GRAPLQ8TC17 118 aaPredicted RBP19.88■□□□□ 0.77
XRCC3-218ENST00000557439 CEP95Q96GE4 821 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 H3BQF6 201 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 GNAQP50148 359 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 MCM6Q14566 821 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
XRCC3-218ENST00000557439 LUC7L2Q9Y383 392 aaKnown RBP19.88■□□□□ 0.77
XRCC3-218ENST00000557439 USP17L5A8MUK1 530 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 UFL1O94874 794 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 RHOBTB3O94955 611 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms