RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RRAGDQ9NQL2 400 aaPredicted RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 A0A087WWV3 80 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 MPHOSPH10O00566 681 aaKnown RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 CAVIN2O95810 425 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ZBTB21Q9ULJ3 1066 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 TMX2Q9Y320 296 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ASTN2O75129 1339 aaPredicted RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 FOXN1O15353 648 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 NDUFB10O96000 172 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 BMP6P22004 513 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 PRPHP41219 470 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 NAPAP54920 295 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 ORC2Q13416 577 aaPredicted RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 SLFN13Q68D06 897 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 LUZP1Q86V48 1076 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 CCDC12Q8WUD4 166 aaPredicted RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 HSD3B7Q9H2F3 369 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 TMEM60Q9H2L4 133 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 MTMR7Q9Y216 660 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 LCTP09848 1927 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 F5H6K3 240 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 OPLAHO14841 1288 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 PRR29P0C7W0 189 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 SLC16A2P36021 539 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 CAP2P40123 477 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 GMPSP49915 693 aaPredicted RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 KLRC3Q07444 240 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 RBM26Q5T8P6 1007 aaKnown RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 PDXDC2PQ6P474 469 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 ZSCAN29Q8IWY8 852 aaPredicted RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 LRRC15Q8TF66 581 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
TDP1-210ENST00000554976 COA7Q96BR5 231 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 TMEM260Q9NX78 707 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
TDP1-210ENST00000554976 ECE1P42892 770 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 NLRP12P59046 1061 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 INF2Q27J81 1249 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 HS1BP3Q53T59 392 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 SASS6Q6UVJ0 657 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 JDP2Q8WYK2 163 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 P2RX7Q99572 595 aaKnown RBP10.15□□□□□ -0.78
TDP1-210ENST00000554976 C6orf50Q9HD87 102 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 SEC63Q9UGP8 760 aaKnown RBP10.15□□□□□ -0.78
TDP1-210ENST00000554976 POLR2AP24928 1970 aaKnown RBP10.15□□□□□ -0.78
TDP1-210ENST00000554976 LAD1O00515 517 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 PLA2G6O60733 806 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 GNA11P29992 359 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 PNOCQ13519 176 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 NCAPHQ15003 741 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 DPCR1Q3MIW9 517 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 HOMER1Q86YM7 354 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 MTMR9Q96QG7 549 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 TMOD2Q9NZR1 351 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.15□□□□□ -0.78
TDP1-210ENST00000554976 SERTAD1Q9UHV2 236 aa10.15□□□□□ -0.78
TDP1-210ENST00000554976 QRICH1Q2TAL8 776 aa10.15□□□□□ -0.79
TDP1-210ENST00000554976 SARM1Q6SZW1 724 aa10.15□□□□□ -0.79
TDP1-210ENST00000554976 MICALL2Q8IY33 904 aa10.15□□□□□ -0.79
TDP1-210ENST00000554976 MTRQ99707 1265 aa10.15□□□□□ -0.79
TDP1-210ENST00000554976 USP25Q9UHP3 1055 aa10.15□□□□□ -0.79
TDP1-210ENST00000554976 MCM7P33993 719 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 LONP1P36776 959 aaKnown RBP10.14□□□□□ -0.79
TDP1-210ENST00000554976 ACER1Q8TDN7 264 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 MBOAT7Q96N66 472 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 NUP88Q99567 741 aaPredicted RBP10.14□□□□□ -0.79
TDP1-210ENST00000554976 VAT1LQ9HCJ6 419 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 ZNF112Q9UJU3 913 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 POLR2DO15514 142 aaKnown RBP10.14□□□□□ -0.79
TDP1-210ENST00000554976 ZNF165P49910 485 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 ADCY7P51828 1080 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 NONOQ15233 471 aaKnown RBP eCLIP10.14□□□□□ -0.79
TDP1-210ENST00000554976 CDC37Q16543 378 aaPredicted RBP10.14□□□□□ -0.79
TDP1-210ENST00000554976 ANO10Q9NW15 660 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
TDP1-210ENST00000554976 CCDC194A0A1B0GVG4 234 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 MEIS2O14770 477 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 ADCY5O95622 1261 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 SLC1A4P43007 532 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 DPYDQ12882 1025 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 MORC3Q14149 939 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 NAALADL2Q58DX5 795 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 REXO1Q8N1G1 1221 aaKnown RBP10.13□□□□□ -0.79
TDP1-210ENST00000554976 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 NAP1L5Q96NT1 182 aaPredicted RBP10.13□□□□□ -0.79
TDP1-210ENST00000554976 BIN2Q9UBW5 565 aaPredicted RBP10.13□□□□□ -0.79
TDP1-210ENST00000554976 SLFN14P0C7P3 912 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 RASA3Q14644 834 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 POSTNQ15063 836 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 NEK8Q86SG6 692 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
TDP1-210ENST00000554976 GLIS2Q9BZE0 524 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms