RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MICAL1Q8TDZ2 1067 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 UBXN4Q92575 508 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 DNAJC2Q99543 621 aaKnown RBP4.93□□□□□ -1.62
USP28-210ENST00000542033 DIS3Q9Y2L1 958 aaKnown RBP4.93□□□□□ -1.62
USP28-210ENST00000542033 NOP56O00567 594 aaKnown RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 SUSD5O60279 629 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 FKTNO75072 461 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 KIR2DL1P43626 348 aaPredicted RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 KIR2DL2P43627 348 aaPredicted RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 NOP2P46087 812 aaKnown RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 POU4F1Q01851 419 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 SNX17Q15036 470 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 SLC14A2Q15849 920 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 SV2CQ496J9 727 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 FYB2Q5VWT5 728 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 POMZP3Q6PJE2 187 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 CRTC3Q6UUV7 619 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 CRACR2BQ8N4Y2 399 aaPredicted RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 LINC01599Q8WXQ3 324 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 MAP6Q96JE9 813 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 FCRL2Q96LA5 508 aaPredicted RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 ZDHHC15Q96MV8 337 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 CWC22Q9HCG8 908 aaKnown RBP4.92□□□□□ -1.62
USP28-210ENST00000542033 SIRPGQ9P1W8 387 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 ZNF281Q9Y2X9 895 aa4.92□□□□□ -1.62
USP28-210ENST00000542033 LRRC10BA6NIK2 292 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 H0Y8X5 98 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 AGRPO00253 132 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 ZNF205O95201 554 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 VAV1P15498 845 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 CTSKP43235 329 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 OGFOD2Q6N063 350 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 BVESQ8NE79 360 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 RCC1LQ96I51 464 aaKnown RBP4.91□□□□□ -1.62
USP28-210ENST00000542033 CDADC1Q9BWV3 514 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 EPN3Q9H201 632 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 USP35Q9P2H5 1018 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 TNFRSF10DQ9UBN6 386 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 APEX2Q9UBZ4 518 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 SUSD2Q9UGT4 822 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 AKT3Q9Y243 479 aa4.91□□□□□ -1.62
USP28-210ENST00000542033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
USP28-210ENST00000542033 TMEM82A0PJX8 343 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 FARP2O94887 1054 aaPredicted RBP4.9□□□□□ -1.63
USP28-210ENST00000542033 CD3EP07766 207 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 ERVFC1P60507 584 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 RBM10P98175 930 aaKnown RBP4.9□□□□□ -1.63
USP28-210ENST00000542033 MRM1Q6IN84 353 aaKnown RBP4.9□□□□□ -1.63
USP28-210ENST00000542033 ARHGEF39Q8N4T4 335 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 POU5F2Q8N7G0 328 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 NAT16Q8N8M0 369 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 G6PC3Q9BUM1 346 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 SLC6A17Q9H1V8 727 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 CGGBP1Q9UFW8 167 aaPredicted RBP4.9□□□□□ -1.63
USP28-210ENST00000542033 GPR160Q9UJ42 338 aa4.9□□□□□ -1.63
USP28-210ENST00000542033 ARID1BQ8NFD5 2236 aaPredicted RBP4.9□□□□□ -1.63
USP28-210ENST00000542033 SHROOM4Q9ULL8 1493 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 LOC105371045A0A1W2PR82 267 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 ZNF503-AS2A6NEH8 195 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 NRDCO43847 1150 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 KCNH1O95259 989 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 GSTM1P09488 218 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 TRHRP34981 398 aaPredicted RBP4.89□□□□□ -1.63
USP28-210ENST00000542033 AMPD2Q01433 879 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 GRB10Q13322 594 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 MLANAQ16655 118 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 DPY19L1Q2PZI1 675 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 CYP2R1Q6VVX0 501 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 CEP128Q6ZU80 1094 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 ST13P5Q8NFI4 369 aaPredicted RBP4.89□□□□□ -1.63
USP28-210ENST00000542033 LIN37Q96GY3 246 aaPredicted RBP4.89□□□□□ -1.63
USP28-210ENST00000542033 SLC38A3Q99624 504 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 RNF32Q9H0A6 362 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 C19orf44Q9H6X5 657 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 TAF6LQ9Y6J9 622 aa4.89□□□□□ -1.63
USP28-210ENST00000542033 IQCA1LA6NCM1 817 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 WTIPA6NIX2 430 aaPredicted RBP4.88□□□□□ -1.63
USP28-210ENST00000542033 PDPK1O15530 556 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 VAMP4O75379 141 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 USP2O75604 605 aaPredicted RBP4.88□□□□□ -1.63
USP28-210ENST00000542033 RTP1P59025 263 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
USP28-210ENST00000542033 PKN1Q16512 942 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 SLC10A6Q3KNW5 377 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 MTERF2Q49AM1 385 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 HLA-DQA1Q5Y7H0 255 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 GALNT18Q6P9A2 607 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 IRF2BP1Q8IU81 584 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 KSR1Q8IVT5 923 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 HHIPL1Q96JK4 782 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 FAM84AQ96KN4 292 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 SRPK1Q96SB4 655 aaKnown RBP4.88□□□□□ -1.63
USP28-210ENST00000542033 SLC12A9Q9BXP2 914 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 CCDC113Q9H0I3 377 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 OSBPL2Q9H1P3 480 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 EPB41L4BQ9H329 900 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 SP110Q9HB58 689 aa4.88□□□□□ -1.63
USP28-210ENST00000542033 AP5S1Q9NUS5 200 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms