RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FXNQ16595 210 aa8.14□□□□□ -1.11
PRKDC-205ENST00000535375 TIGD5Q53EQ6 642 aa8.14□□□□□ -1.11
PRKDC-205ENST00000535375 SLC6A17Q9H1V8 727 aa8.14□□□□□ -1.11
PRKDC-205ENST00000535375 SP110Q9HB58 689 aa8.14□□□□□ -1.11
PRKDC-205ENST00000535375 WTIPA6NIX2 430 aaPredicted RBP8.13□□□□□ -1.11
PRKDC-205ENST00000535375 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 PSPNO60542 156 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 DDAH1O94760 285 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 POU5F2Q8N7G0 328 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 PPP1R14AQ96A00 147 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 DIRC2Q96SL1 478 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 GMLQ99445 158 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 SLC38A3Q99624 504 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
PRKDC-205ENST00000535375 ERVK13-1Q9NX77 482 aa8.13□□□□□ -1.11
PRKDC-205ENST00000535375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRKDC-205ENST00000535375 GPR55Q9Y2T6 319 aaPredicted RBP8.13□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQ27 194 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQ64 194 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQD8 194 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 NRDCO43847 1150 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 ZNF143P52747 638 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 NAALADL2Q58DX5 795 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 GALNT18Q6P9A2 607 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 C6orf15Q6UXA7 325 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 PRR23BQ6ZRT6 265 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 KSR1Q8IVT5 923 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 SIRT2Q8IXJ6 389 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 CRACR2BQ8N4Y2 399 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 FCRL3Q96P31 734 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 EPB41L4BQ9H329 900 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 DCP1AQ9NPI6 582 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
PRKDC-205ENST00000535375 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
PRKDC-205ENST00000535375 FADS2P1A8MWK0 482 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 NOP56O00567 594 aaKnown RBP8.11□□□□□ -1.11
PRKDC-205ENST00000535375 PDE6BP35913 854 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 AMPD2Q01433 879 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 PKN1Q16512 942 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 DPY19L1Q2PZI1 675 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 RTP2Q5QGT7 225 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 JAMLQ86YT9 394 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 ARHGEF39Q8N4T4 335 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 FAM84AQ96KN4 292 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
PRKDC-205ENST00000535375 CGGBP1Q9UFW8 167 aaPredicted RBP8.11□□□□□ -1.11
PRKDC-205ENST00000535375 SUSD2Q9UGT4 822 aa8.11□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQ45 241 aaPredicted RBP8.1□□□□□ -1.11
PRKDC-205ENST00000535375 A0A1W2PQY0 241 aa8.1□□□□□ -1.11
PRKDC-205ENST00000535375 VAMP4O75379 141 aa8.1□□□□□ -1.11
PRKDC-205ENST00000535375 TBC1D8O95759 1140 aa8.1□□□□□ -1.11
PRKDC-205ENST00000535375 ZNF648Q5T619 568 aaPredicted RBP8.1□□□□□ -1.11
PRKDC-205ENST00000535375 CYP2R1Q6VVX0 501 aa8.1□□□□□ -1.11
PRKDC-205ENST00000535375 FGF10O15520 208 aaPredicted RBP8.09□□□□□ -1.11
PRKDC-205ENST00000535375 IFNGR1P15260 489 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 ARL4AP40617 200 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 SEPHS1P49903 392 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 GALK1P51570 392 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 GRB10Q13322 594 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
PRKDC-205ENST00000535375 ANKS3Q6ZW76 656 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 NLRX1Q86UT6 975 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 BVESQ8NE79 360 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 INTS4Q96HW7 963 aaKnown RBP8.09□□□□□ -1.11
PRKDC-205ENST00000535375 PTCHD1Q96NR3 888 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 CRTAC1Q9NQ79 661 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 LRP2BPQ9P2M1 347 aa8.09□□□□□ -1.11
PRKDC-205ENST00000535375 NOTOA8MTQ0 251 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 STXBP3O00186 592 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
PRKDC-205ENST00000535375 C8AP07357 584 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 SV2CQ496J9 727 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 EEF1DP3Q658K8 133 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 FBXO15Q8NCQ5 510 aaPredicted RBP8.08□□□□□ -1.12
PRKDC-205ENST00000535375 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 APEX2Q9UBZ4 518 aa8.08□□□□□ -1.12
PRKDC-205ENST00000535375 AURKAO14965 403 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 KCNH1O95259 989 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 PNLIPP16233 465 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 PRKCAP17252 672 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 CYP4F8P98187 520 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 LAPTM5Q13571 262 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 ADGRF1Q5T601 910 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 NUP43Q8NFH3 380 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 SHISA4Q96DD7 197 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 PLCD4Q9BRC7 762 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 BACE2Q9Y5Z0 518 aa8.07□□□□□ -1.12
PRKDC-205ENST00000535375 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
PRKDC-205ENST00000535375 C2orf71A6NGG8 1288 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms