RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 WHRNQ9P202 907 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 PPP1R1BQ9UD71 204 aaPredicted RBP7.09□□□□□ -1.27
C11orf88-204ENST00000529661 SF3B6Q9Y3B4 125 aaKnown RBP7.09□□□□□ -1.27
C11orf88-204ENST00000529661 C8AP07357 584 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 CD3EP07766 207 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 KIR2DL1P43626 348 aaPredicted RBP7.08□□□□□ -1.28
C11orf88-204ENST00000529661 KIR2DL2P43627 348 aaPredicted RBP7.08□□□□□ -1.28
C11orf88-204ENST00000529661 RTP2Q5QGT7 225 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 KSR1Q8IVT5 923 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 SLC12A9Q9BXP2 914 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 GPR55Q9Y2T6 319 aaPredicted RBP7.08□□□□□ -1.28
C11orf88-204ENST00000529661 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
C11orf88-204ENST00000529661 NOTOA8MTQ0 251 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 PPM1BO75688 479 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 ATP2B1P20020 1258 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 RTP1P59025 263 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 LARP1BQ659C4 914 aaKnown RBP7.07□□□□□ -1.28
C11orf88-204ENST00000529661 ARMC5Q96C12 935 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 EPB41L4BQ9H329 900 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 KCNK12Q9HB15 430 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
C11orf88-204ENST00000529661 DCP1AQ9NPI6 582 aaPredicted RBP7.07□□□□□ -1.28
C11orf88-204ENST00000529661 ACTR10Q9NZ32 417 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 TNFRSF10DQ9UBN6 386 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 YBX2Q9Y2T7 364 aaKnown RBP7.07□□□□□ -1.28
C11orf88-204ENST00000529661 TAF6LQ9Y6J9 622 aa7.07□□□□□ -1.28
C11orf88-204ENST00000529661 EFEMP2O95967 443 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 FGRP09769 529 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 PDE6BP35913 854 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 ETFBP38117 255 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 POU4F1Q01851 419 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 RBL2Q08999 1139 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 MESP2Q0VG99 397 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 SNX17Q15036 470 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 TNNI3KQ59H18 835 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 INTS4Q96HW7 963 aaKnown RBP7.06□□□□□ -1.28
C11orf88-204ENST00000529661 FAM84AQ96KN4 292 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 SLC38A3Q99624 504 aa7.06□□□□□ -1.28
C11orf88-204ENST00000529661 DIS3Q9Y2L1 958 aaKnown RBP7.06□□□□□ -1.28
C11orf88-204ENST00000529661 A0A087WZG4 1122 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 ANKRD34BA5PLL1 514 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 FADS2P1A8MWK0 482 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 NRDCO43847 1150 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 IFNGR1P15260 489 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 NOP2P46087 812 aaKnown RBP7.05□□□□□ -1.28
C11orf88-204ENST00000529661 ZNF124Q15973 351 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 PKN1Q16512 942 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 NLRX1Q86UT6 975 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
C11orf88-204ENST00000529661 PLCD4Q9BRC7 762 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 CGGBP1Q9UFW8 167 aaPredicted RBP7.05□□□□□ -1.28
C11orf88-204ENST00000529661 PRKAG3Q9UGI9 489 aa7.05□□□□□ -1.28
C11orf88-204ENST00000529661 STXBP3O00186 592 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 NCAPHQ15003 741 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 DPY19L1Q2PZI1 675 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
C11orf88-204ENST00000529661 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
C11orf88-204ENST00000529661 ZNF605Q86T29 641 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 PPP1R14AQ96A00 147 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 ZNF408Q9H9D4 720 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 APEX2Q9UBZ4 518 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 SUSD2Q9UGT4 822 aa7.04□□□□□ -1.28
C11orf88-204ENST00000529661 WTIPA6NIX2 430 aaPredicted RBP7.03□□□□□ -1.28
C11orf88-204ENST00000529661 B2RBV5 119 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 VAMP4O75379 141 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 KIR3DS1Q14943 382 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 GALNT18Q6P9A2 607 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 SYDE1Q6ZW31 735 aaPredicted RBP7.03□□□□□ -1.28
C11orf88-204ENST00000529661 SLCO6A1Q86UG4 719 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 JAMLQ86YT9 394 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 FBXO15Q8NCQ5 510 aaPredicted RBP7.03□□□□□ -1.28
C11orf88-204ENST00000529661 TMEM52Q8NDY8 209 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 APBA2Q99767 749 aa7.03□□□□□ -1.28
C11orf88-204ENST00000529661 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 FGF10O15520 208 aaPredicted RBP7.02□□□□□ -1.29
C11orf88-204ENST00000529661 DDAH1O94760 285 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 NAT2P11245 290 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 PRKCAP17252 672 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 SDHBP21912 280 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
C11orf88-204ENST00000529661 JAG1P78504 1218 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 AMPD2Q01433 879 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 FAM178BQ8IXR5 827 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 ARHGEF39Q8N4T4 335 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 NUP43Q8NFH3 380 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 JMJD8Q96S16 334 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 MCMBPQ9BTE3 642 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 IMPACTQ9P2X3 320 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 AKT3Q9Y243 479 aa7.02□□□□□ -1.29
C11orf88-204ENST00000529661 R3HCC1Q9Y3T6 440 aaKnown RBP7.02□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQC6 194 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms