RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CCDC148Q8NFR7 591 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 ABHD10Q9NUJ1 306 aa12.31□□□□□ -0.44
LIN54-207ENST00000508171 ZRANB2O95218 330 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIN54-207ENST00000508171 TFRCP02786 760 aaKnown RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 PNMA6AP0CW24 399 aaPredicted RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 LETM2Q2VYF4 491 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 ZNF569Q5MCW4 686 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 RSRC2Q7L4I2 434 aaKnown RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 H7C1D1 291 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 KRT9P35527 623 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 NAPAP54920 295 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 CCDC178Q5BJE1 867 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
LIN54-207ENST00000508171 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 CHP1Q99653 195 aa12.3□□□□□ -0.44
LIN54-207ENST00000508171 GPR75-ASB3A0A0A6YYF3 556 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 SMCO2A6NFE2 343 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 ZBTB22O15209 634 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 TPM1P09493 284 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 FECHP22830 423 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 SPAG1Q07617 926 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 CCSER1Q9C0I3 900 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
LIN54-207ENST00000508171 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
LIN54-207ENST00000508171 KIF5CO60282 957 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 PLCG1P19174 1290 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 PLA2G4AP47712 749 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 TMTC1Q8IUR5 882 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 PIGSQ96S52 555 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 PARD6BQ9BYG5 372 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 ARGLU1Q9NWB6 273 aaPredicted RBP12.29□□□□□ -0.44
LIN54-207ENST00000508171 USP21Q9UK80 565 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 FLT1P17948 1338 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
LIN54-207ENST00000508171 TTC26A0AVF1 554 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 TOM1O60784 492 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 TECP42680 631 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 RHBDL3P58872 404 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 GABPB1Q06547 395 aaPredicted RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 TERF2Q15554 542 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 SLC35F6Q8N357 371 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 GPR161Q8N6U8 529 aaKnown RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 USP17L5A8MUK1 530 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 RHOBTB3O94955 611 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 KCNB1Q14721 858 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 CABP7Q86V35 215 aa12.28□□□□□ -0.44
LIN54-207ENST00000508171 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
LIN54-207ENST00000508171 IL1R1P14778 569 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 PRPHP41219 470 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 MB21D1Q8N884 522 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 TRIM47Q96LD4 638 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 TMEM260Q9NX78 707 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 GGA1Q9UJY5 639 aa12.27□□□□□ -0.44
LIN54-207ENST00000508171 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 LAD1O00515 517 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 SASH3O75995 380 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 ARHGAP25P42331 645 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 NT5C2P49902 561 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 STK4Q13043 487 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
LIN54-207ENST00000508171 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.45
LIN54-207ENST00000508171 ZNF507Q8TCN5 953 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 TBCKQ8TEA7 893 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 HPS3Q969F9 1004 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 RRP36Q96EU6 259 aaKnown RBP12.27□□□□□ -0.45
LIN54-207ENST00000508171 C6orf50Q9HD87 102 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 LY75O60449 1722 aa12.27□□□□□ -0.45
LIN54-207ENST00000508171 FRMPD2Q68DX3 1309 aaPredicted RBP12.26□□□□□ -0.45
LIN54-207ENST00000508171 PSMA7O14818 248 aa12.26□□□□□ -0.45
LIN54-207ENST00000508171 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms