RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 SEPHS1P49903 392 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 USP14P54578 494 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 SEZ6Q53EL9 994 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 TRIM68Q6AZZ1 485 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 SLC44A2Q8IWA5 706 aaPredicted RBP8.19□□□□□ -1.1
CDH9-202ENST00000505020 GOLM1Q8NBJ4 401 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 GPKOWQ92917 476 aaPredicted RBP eCLIP8.19□□□□□ -1.1
CDH9-202ENST00000505020 RHOVQ96L33 236 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 UBXN10Q96LJ8 280 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 ZNF396Q96N95 335 aaPredicted RBP8.19□□□□□ -1.1
CDH9-202ENST00000505020 TSGA13Q96PP4 275 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
CDH9-202ENST00000505020 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
CDH9-202ENST00000505020 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
CDH9-202ENST00000505020 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 PCDHB3Q9Y5E6 796 aa8.19□□□□□ -1.1
CDH9-202ENST00000505020 P4HA2O15460 535 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 AHCYL1O43865 530 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 BRINP1O60477 761 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 SNUPNO95149 360 aaKnown RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 PF4P02776 101 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 STAT1P42224 750 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 TM4SF4P48230 202 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 EPHA4P54764 986 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 NLRP12P59046 1061 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 CCDC30Q5VVM6 783 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 C7orf31Q8N865 590 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 NEK9Q8TD19 979 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 AGO4Q9HCK5 861 aaKnown RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 CPSF2Q9P2I0 782 aaKnown RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 MTRRQ9UBK8 725 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 SERTAD1Q9UHV2 236 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 EIF4G1Q04637 1599 aaKnown RBP8.18□□□□□ -1.1
CDH9-202ENST00000505020 PIK3R4Q99570 1358 aa8.18□□□□□ -1.1
CDH9-202ENST00000505020 TRIM75PA6NK02 468 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 ADCY3O60266 1144 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 DKC1O60832 514 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDH9-202ENST00000505020 IPO7O95373 1038 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 AKR1B1P15121 316 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 BTF3P20290 206 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 WTAPQ15007 396 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SLC10A6Q3KNW5 377 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 RRP12Q5JTH9 1297 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 C6orf15Q6UXA7 325 aaPredicted RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 RNF19BQ6ZMZ0 732 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SLITRK4Q8IW52 837 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 CPA6Q8N4T0 437 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 ZNF669Q96BR6 464 aaPredicted RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 CCDC138Q96M89 665 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ASB2Q96Q27 587 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SPATA9Q9BWV2 254 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 NPHS2Q9NP85 383 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ZMAT5Q9UDW3 170 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 ATP6V0A2Q9Y487 856 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 A0A0B4J203 849 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 H3BRJ5 948 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 PLD2O14939 933 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 FRS3O43559 492 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 DDX58O95786 925 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 KRT1P04264 644 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 KRT13P13646 458 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 PCSK2P16519 638 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 RHCEP18577 417 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SKOR1P84550 965 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 RHDQ02161 417 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 KCNC4Q03721 635 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SLC20A2Q08357 652 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 TERF2Q15554 542 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ASIC2Q16515 512 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 SNAP47Q5SQN1 464 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 LLGL2Q6P1M3 1020 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 FIP1L1Q6UN15 594 aaKnown RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 MFSD6Q6ZSS7 791 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 PPM1KQ8N3J5 372 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 BRSK1Q8TDC3 778 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 TEKT1Q969V4 418 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 FERD3LQ96RJ6 166 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 BRD9Q9H8M2 597 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 IFT80Q9P2H3 777 aaPredicted RBP8.17□□□□□ -1.1
CDH9-202ENST00000505020 PTPN22Q9Y2R2 807 aa8.17□□□□□ -1.1
CDH9-202ENST00000505020 C2orf81A6NN90 581 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 INO80B-WBP1J3KQ70 363 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 ARAFP10398 606 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 MCM4P33991 863 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 LIMK1P53667 647 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 PCBP1Q15365 356 aaKnown RBP eCLIP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms