RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 AURKAO14965 403 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 SUSD5O60279 629 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 FKTNO75072 461 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 USP2O75604 605 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 ERVFC1P60507 584 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 RAB33AQ14088 237 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 TMEM67Q5HYA8 995 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 LARP1BQ659C4 914 aaKnown RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 ANKS3Q6ZW76 656 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 IRF2BP1Q8IU81 584 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 BVESQ8NE79 360 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 FCRL3Q96P31 734 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 CDADC1Q9BWV3 514 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 RNF32Q9H0A6 362 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 CRTAC1Q9NQ79 661 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 AP5S1Q9NUS5 200 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
ITGB1-216ENST00000493758 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
ITGB1-216ENST00000493758 B2RBV5 119 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 CORO7P57737 925 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 MICAL1Q8TDZ2 1067 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 ZNF669Q96BR6 464 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-216ENST00000493758 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 FGD4Q96M96 766 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 ZDHHC15Q96MV8 337 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 APBA2Q99767 749 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 TANGO6Q9C0B7 1094 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
ITGB1-216ENST00000493758 GPR55Q9Y2T6 319 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-216ENST00000493758 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
ITGB1-216ENST00000493758 HRKO00198 91 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 GJB6O95452 261 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 EFEMP2O95967 443 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 CAPNS1P04632 268 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 CD3EP07766 207 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 TXKP42681 527 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 AMPD2Q01433 879 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 ZPBP2Q6X784 338 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 CEP128Q6ZU80 1094 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 CKAP2LQ8IYA6 745 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 TMEM52Q8NDY8 209 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-216ENST00000493758 ADCY4Q8NFM4 1077 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 BACE2Q9Y5Z0 518 aa6.85□□□□□ -1.31
ITGB1-216ENST00000493758 WTIPA6NIX2 430 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 STK10O94804 968 aaKnown RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 GSTM1P09488 218 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 IFNGR1P15260 489 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 ATP2B1P20020 1258 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 RTP1P59025 263 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 SLC10A6Q3KNW5 377 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 HSF5Q4G112 596 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 GALNT18Q6P9A2 607 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 ADAT2Q7Z6V5 191 aaKnown RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 ST13P5Q8NFI4 369 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 COPS5Q92905 334 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 PTCHD1Q96NR3 888 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 MCMBPQ9BTE3 642 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 C19orf44Q9H6X5 657 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 R3HCC1Q9Y3T6 440 aaKnown RBP6.84□□□□□ -1.31
ITGB1-216ENST00000493758 TAF6LQ9Y6J9 622 aa6.84□□□□□ -1.31
ITGB1-216ENST00000493758 TRBV23OR9-2A0A075B6M9 112 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 PSPNO60542 156 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 DDAH1O94760 285 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 TRHRP34981 398 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-216ENST00000493758 RBL2Q08999 1139 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 TESK1Q15569 626 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 HLA-DQA1Q5Y7H0 255 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
ITGB1-216ENST00000493758 HIRIP3Q9BW71 556 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-216ENST00000493758 NKX2-4Q9H2Z4 354 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 ACSL6Q9UKU0 697 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 AKT3Q9Y243 479 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 SUGT1Q9Y2Z0 365 aa6.83□□□□□ -1.32
ITGB1-216ENST00000493758 STXBP3O00186 592 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 NOP56O00567 594 aaKnown RBP6.82□□□□□ -1.32
ITGB1-216ENST00000493758 SCG5P05408 212 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 PNLIPP16233 465 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 ERVFRD-1P60508 538 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 MESP2Q0VG99 397 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 SERINC3Q13530 473 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 PPP2R5DQ14738 602 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 NAT16Q8N8M0 369 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 NLGN2Q8NFZ4 835 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 LIN37Q96GY3 246 aaPredicted RBP6.82□□□□□ -1.32
ITGB1-216ENST00000493758 SGSM3Q96HU1 749 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
ITGB1-216ENST00000493758 LRRC10BA6NIK2 292 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
ITGB1-216ENST00000493758 LAPTM5Q13571 262 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms