RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 EHMT1Q9H9B1 1298 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 EPB41L4AQ9HCS5 686 aaPredicted RBP7.6□□□□□ -1.19
SMC4-223ENST00000493695 GREM1O60565 184 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 GSTM1P09488 218 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 VAV1P15498 845 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 NME1P15531 152 aaKnown RBP7.59□□□□□ -1.19
SMC4-223ENST00000493695 BMP8BP34820 402 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
SMC4-223ENST00000493695 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
SMC4-223ENST00000493695 TMEFF1Q8IYR6 380 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 NKD1Q969G9 470 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 ADAM7Q9H2U9 754 aa7.59□□□□□ -1.19
SMC4-223ENST00000493695 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
SMC4-223ENST00000493695 ZNF205O95201 554 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 CTSKP43235 329 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 NOL9Q5SY16 702 aaKnown RBP7.58□□□□□ -1.2
SMC4-223ENST00000493695 ZC3H14Q6PJT7 736 aaKnown RBP7.58□□□□□ -1.2
SMC4-223ENST00000493695 RPTNQ6XPR3 784 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 SLCO6A1Q86UG4 719 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 IGDCC3Q8IVU1 814 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
SMC4-223ENST00000493695 JMJD8Q96S16 334 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
SMC4-223ENST00000493695 ZNF200P98182 395 aaPredicted RBP7.57□□□□□ -1.2
SMC4-223ENST00000493695 CXorf38Q8TB03 319 aa7.57□□□□□ -1.2
SMC4-223ENST00000493695 DHRS1Q96LJ7 313 aa7.57□□□□□ -1.2
SMC4-223ENST00000493695 FAM86C1Q9NVL1 165 aa7.57□□□□□ -1.2
SMC4-223ENST00000493695 PFKLP17858 780 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 LIMS1P48059 325 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 TDRD10Q5VZ19 366 aaKnown RBP7.56□□□□□ -1.2
SMC4-223ENST00000493695 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 DBX2Q6ZNG2 339 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 REXO1Q8N1G1 1221 aaKnown RBP7.56□□□□□ -1.2
SMC4-223ENST00000493695 LINC01356Q8N9X3 169 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 SLC9A7Q96T83 725 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
SMC4-223ENST00000493695 DBR1Q9UK59 544 aaKnown RBP7.56□□□□□ -1.2
SMC4-223ENST00000493695 GSNP06396 782 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 ERCC3P19447 782 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 SKOR2Q2VWA4 1001 aaPredicted RBP7.55□□□□□ -1.2
SMC4-223ENST00000493695 PLEKHN1Q494U1 663 aaPredicted RBP7.55□□□□□ -1.2
SMC4-223ENST00000493695 HLA-DQA1Q5Y7H0 255 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 NLGN1Q8N2Q7 840 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 RGS22Q8NE09 1264 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 TNFRSF12AQ9NP84 129 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 ACSL6Q9UKU0 697 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 FAN1Q9Y2M0 1017 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 PCDHA5Q9Y5H7 936 aa7.55□□□□□ -1.2
SMC4-223ENST00000493695 PLP2Q04941 152 aa7.54□□□□□ -1.2
SMC4-223ENST00000493695 NR1I3Q14994 352 aa7.54□□□□□ -1.2
SMC4-223ENST00000493695 ZNF326Q5BKZ1 582 aaKnown RBP7.54□□□□□ -1.2
SMC4-223ENST00000493695 BRF1Q92994 677 aa7.54□□□□□ -1.2
SMC4-223ENST00000493695 SUCOQ9UBS9 1254 aaKnown RBP7.54□□□□□ -1.2
SMC4-223ENST00000493695 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
SMC4-223ENST00000493695 C9IYK1 514 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
SMC4-223ENST00000493695 KCNC1P48547 511 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
SMC4-223ENST00000493695 KIAA0825Q8IV33 1275 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 BDH2Q9BUT1 245 aa7.53□□□□□ -1.2
SMC4-223ENST00000493695 MSL3P1P0C860 447 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 TACR1P25103 407 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 MAPKAPK2P49137 400 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 DCAF15Q66K64 600 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 TMEM52Q8NDY8 209 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 FERD3LQ96RJ6 166 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 SPON2Q9BUD6 331 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
SMC4-223ENST00000493695 LUC7LQ9NQ29 371 aaKnown RBP7.52□□□□□ -1.21
SMC4-223ENST00000493695 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
SMC4-223ENST00000493695 ZC3H12DA2A288 527 aaKnown RBP7.51□□□□□ -1.21
SMC4-223ENST00000493695 H0Y8X5 98 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 NOP2P46087 812 aaKnown RBP7.51□□□□□ -1.21
SMC4-223ENST00000493695 MVKQ03426 396 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 CBX2Q14781 532 aaPredicted RBP7.51□□□□□ -1.21
SMC4-223ENST00000493695 TARBP2Q15633 366 aaKnown RBP7.51□□□□□ -1.21
SMC4-223ENST00000493695 RTP2Q5QGT7 225 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 SLC12A9Q9BXP2 914 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 SUSD2Q9UGT4 822 aa7.51□□□□□ -1.21
SMC4-223ENST00000493695 MEIS3P2A8K0S8 358 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 F8W031 263 aaPredicted RBP7.5□□□□□ -1.21
SMC4-223ENST00000493695 PAQR3Q6TCH7 311 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 ADGRG2Q8IZP9 1017 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 NT5C1AQ9BXI3 368 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 PRR13Q9NZ81 148 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 HCFC2Q9Y5Z7 792 aa7.5□□□□□ -1.21
SMC4-223ENST00000493695 CD3EP07766 207 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms