RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
LSM2-214ENST00000493387 CYP2C8P10632 490 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 CCNA1P78396 465 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
LSM2-214ENST00000493387 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 DNAJC5GQ8N7S2 189 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
LSM2-214ENST00000493387 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
LSM2-214ENST00000493387 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 KIF3AQ9Y496 699 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 DEXIO95424 95 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 SLC25A27O95847 323 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 ICAM1P05362 532 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 FAM110CQ1W6H9 321 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 FBXO11Q86XK2 927 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 FAM177A1Q8N128 213 aaPredicted RBP13.36□□□□□ -0.27
LSM2-214ENST00000493387 CMTR1Q8N1G2 835 aaKnown RBP13.36□□□□□ -0.27
LSM2-214ENST00000493387 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
LSM2-214ENST00000493387 REPS2Q8NFH8 660 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 PIGSQ96S52 555 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
LSM2-214ENST00000493387 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
LSM2-214ENST00000493387 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 HSP90AA1P07900 732 aaKnown RBP13.35□□□□□ -0.27
LSM2-214ENST00000493387 SCG2P13521 617 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 STAT3P40763 770 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 CRHR2Q13324 411 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 TMEM132BQ14DG7 1078 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
LSM2-214ENST00000493387 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 SMARCC2Q8TAQ2 1214 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 PHKBQ93100 1093 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 MAF1Q9H063 256 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
LSM2-214ENST00000493387 ADGRA2Q96PE1 1338 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
LSM2-214ENST00000493387 BCRP11274 1271 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 XBP1P17861 261 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 ERVK-24P63145 666 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 PLS1Q14651 629 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 PIBF1Q8WXW3 757 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 SH3GLB2Q9NR46 395 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 ZNF214Q9UL59 606 aaPredicted RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 ABCB11O95342 1321 aa13.34□□□□□ -0.27
LSM2-214ENST00000493387 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
LSM2-214ENST00000493387 RLFQ13129 1914 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 TRPA1O75762 1119 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 CNMDO75829 334 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 SNAP25P60880 206 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
LSM2-214ENST00000493387 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
LSM2-214ENST00000493387 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 CHST13Q8NET6 341 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 MROH8Q9H579 483 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 TXNRD2Q9NNW7 524 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 CPA4Q9UI42 421 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 PCDHA1Q9Y5I3 950 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 ZNF536O15090 1300 aa13.33□□□□□ -0.28
LSM2-214ENST00000493387 JAK2O60674 1132 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 ALAS1P13196 640 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 PDIA4P13667 645 aaKnown RBP13.32□□□□□ -0.28
LSM2-214ENST00000493387 MAPK4P31152 587 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms