RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 FAM168AQ92567 244 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 PPP1R14AQ96A00 147 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 KIRREL1Q96J84 757 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 HHIPL1Q96JK4 782 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 MCMBPQ9BTE3 642 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 HIRIP3Q9BW71 556 aaPredicted RBP8.13□□□□□ -1.11
CALD1-219ENST00000480638 EMC9Q9Y3B6 208 aa8.13□□□□□ -1.11
CALD1-219ENST00000480638 VAMP4O75379 141 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 TRHRP34981 398 aaPredicted RBP8.12□□□□□ -1.11
CALD1-219ENST00000480638 NOP2P46087 812 aaKnown RBP8.12□□□□□ -1.11
CALD1-219ENST00000480638 NR0B2Q15466 257 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 SV2CQ496J9 727 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 SPPL2CQ8IUH8 684 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 CRACR2BQ8N4Y2 399 aaPredicted RBP8.12□□□□□ -1.11
CALD1-219ENST00000480638 ABHD4Q8TB40 342 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 LGR4Q9BXB1 951 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 GPR55Q9Y2T6 319 aaPredicted RBP8.12□□□□□ -1.11
CALD1-219ENST00000480638 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
CALD1-219ENST00000480638 STXBP3O00186 592 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 AURKAO14965 403 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 FGF10O15520 208 aaPredicted RBP8.11□□□□□ -1.11
CALD1-219ENST00000480638 CEBPAP49715 358 aaPredicted RBP8.11□□□□□ -1.11
CALD1-219ENST00000480638 AMPD2Q01433 879 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 RBL2Q08999 1139 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 DPY19L1Q2PZI1 675 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 SLC10A6Q3KNW5 377 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 TRIM59Q8IWR1 403 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 LILRA2Q8N149 483 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
CALD1-219ENST00000480638 NOTOA8MTQ0 251 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 FADS2P1A8MWK0 482 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 NOP56O00567 594 aaKnown RBP8.1□□□□□ -1.11
CALD1-219ENST00000480638 U2SURPO15042 1029 aaKnown RBP8.1□□□□□ -1.11
CALD1-219ENST00000480638 KCNH1O95259 989 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 RCSD1Q6JBY9 416 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 CEP128Q6ZU80 1094 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 ZNF227Q86WZ6 799 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 NAT16Q8N8M0 369 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 ASIC4Q96FT7 647 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 MRGPRX3Q96LB0 322 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 EPN3Q9H201 632 aa8.1□□□□□ -1.11
CALD1-219ENST00000480638 TBX1O43435 398 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 NRDCO43847 1150 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 GLI1P08151 1106 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 CYP2R1Q6VVX0 501 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 TMEM52Q8NDY8 209 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 RNF32Q9H0A6 362 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 BACE2Q9Y5Z0 518 aa8.09□□□□□ -1.11
CALD1-219ENST00000480638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
CALD1-219ENST00000480638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.08□□□□□ -1.12
CALD1-219ENST00000480638 PSPNO60542 156 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 EFEMP2O95967 443 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 ITGAVP06756 1048 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 SERINC3Q13530 473 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 SLCO6A1Q86UG4 719 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 PTCHD1Q96NR3 888 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 LRP2BPQ9P2M1 347 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 GPR160Q9UJ42 338 aa8.08□□□□□ -1.12
CALD1-219ENST00000480638 ZNF503-AS2A6NEH8 195 aa8.07□□□□□ -1.12
CALD1-219ENST00000480638 RTP1P59025 263 aa8.07□□□□□ -1.12
CALD1-219ENST00000480638 SLC14A2Q15849 920 aa8.07□□□□□ -1.12
CALD1-219ENST00000480638 HSF5Q4G112 596 aaPredicted RBP8.07□□□□□ -1.12
CALD1-219ENST00000480638 EEF1DP3Q658K8 133 aa8.07□□□□□ -1.12
CALD1-219ENST00000480638 ST13P5Q8NFI4 369 aaPredicted RBP8.07□□□□□ -1.12
CALD1-219ENST00000480638 SIRPGQ9P1W8 387 aa8.07□□□□□ -1.12
CALD1-219ENST00000480638 C2orf71A6NGG8 1288 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 AGRPO00253 132 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 SCRN1Q12765 414 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 NLRX1Q86UT6 975 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 KSR1Q8IVT5 923 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 SHISA4Q96DD7 197 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
CALD1-219ENST00000480638 PLCD4Q9BRC7 762 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
CALD1-219ENST00000480638 TAF6LQ9Y6J9 622 aa8.06□□□□□ -1.12
CALD1-219ENST00000480638 A0A1W2PQ45 241 aaPredicted RBP8.05□□□□□ -1.12
CALD1-219ENST00000480638 A0A1W2PQY0 241 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 PDPK1O15530 556 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 SEPHS1P49903 392 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 SNX17Q15036 470 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 HLA-DQA1Q5Y7H0 255 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 COPS5Q92905 334 aa8.05□□□□□ -1.12
CALD1-219ENST00000480638 A0A1W2PQU0 124 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 WTIPA6NIX2 430 aaPredicted RBP8.04□□□□□ -1.12
CALD1-219ENST00000480638 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
CALD1-219ENST00000480638 PAX4O43316 350 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms